Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC073488.3-201ENST00000631611 778 ntBASIC4.65□□□□□ -1.67
SSSCA1O60232 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SSSCA1O60232 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SSSCA1O60232 ZCWPW2-201ENST00000383768 1716 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
SSSCA1O60232 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SSSCA1O60232 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC4.65□□□□□ -1.67
SSSCA1O60232 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
SSSCA1O60232 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SSSCA1O60232 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
SSSCA1O60232 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.67
SSSCA1O60232 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SSSCA1O60232 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC4.64□□□□□ -1.67
SSSCA1O60232 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC4.64□□□□□ -1.67
SSSCA1O60232 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC4.64□□□□□ -1.67
SSSCA1O60232 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SSSCA1O60232 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SSSCA1O60232 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.64□□□□□ -1.67
SSSCA1O60232 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SSSCA1O60232 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SSSCA1O60232 SNORA21-201ENST00000362423 132 ntBASIC4.64□□□□□ -1.67
SSSCA1O60232 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC4.64□□□□□ -1.67
SSSCA1O60232 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SSSCA1O60232 FTH1P26-201ENST00000406512 701 ntBASIC4.64□□□□□ -1.67
SSSCA1O60232 MIR1266-201ENST00000408125 84 ntBASIC4.64□□□□□ -1.67
SSSCA1O60232 AC096921.1-201ENST00000411661 375 ntBASIC4.64□□□□□ -1.67
SSSCA1O60232 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC4.64□□□□□ -1.67
SSSCA1O60232 AC108479.1-201ENST00000431142 427 ntBASIC4.64□□□□□ -1.67
SSSCA1O60232 AC010086.1-201ENST00000437359 1052 ntBASIC4.64□□□□□ -1.67
SSSCA1O60232 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC4.64□□□□□ -1.67
SSSCA1O60232 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.64□□□□□ -1.67
SSSCA1O60232 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SSSCA1O60232 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC4.64□□□□□ -1.67
SSSCA1O60232 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC4.64□□□□□ -1.67
SSSCA1O60232 OR7E116P-201ENST00000448529 957 ntBASIC4.64□□□□□ -1.67
SSSCA1O60232 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC4.64□□□□□ -1.67
SSSCA1O60232 SLAMF6P1-201ENST00000451067 602 ntBASIC4.64□□□□□ -1.67
SSSCA1O60232 AL157777.1-201ENST00000468100 304 ntBASIC4.64□□□□□ -1.67
SSSCA1O60232 DUTP1-201ENST00000493631 470 ntBASIC4.64□□□□□ -1.67
SSSCA1O60232 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC4.64□□□□□ -1.67
SSSCA1O60232 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC4.64□□□□□ -1.67
SSSCA1O60232 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.64□□□□□ -1.67
SSSCA1O60232 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.64□□□□□ -1.67
SSSCA1O60232 AC084851.2-201ENST00000530377 364 ntBASIC4.64□□□□□ -1.67
SSSCA1O60232 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SSSCA1O60232 TDGP1-201ENST00000543961 1229 ntBASIC4.64□□□□□ -1.67
SSSCA1O60232 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC4.64□□□□□ -1.67
SSSCA1O60232 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.64□□□□□ -1.67
SSSCA1O60232 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC4.64□□□□□ -1.67
SSSCA1O60232 NIFKP4-201ENST00000567275 1192 ntBASIC4.64□□□□□ -1.67
SSSCA1O60232 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC4.64□□□□□ -1.67
SSSCA1O60232 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC4.64□□□□□ -1.67
SSSCA1O60232 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC4.64□□□□□ -1.67
SSSCA1O60232 AC099777.1-201ENST00000603779 1070 ntBASIC4.64□□□□□ -1.67
SSSCA1O60232 AC092944.2-201ENST00000605443 889 ntBASIC4.64□□□□□ -1.67
SSSCA1O60232 AL139124.1-201ENST00000609123 421 ntBASIC4.64□□□□□ -1.67
SSSCA1O60232 AC068726.1-201ENST00000610993 341 ntBASIC4.64□□□□□ -1.67
SSSCA1O60232 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC4.64□□□□□ -1.67
SSSCA1O60232 OR11H2-202ENST00000641517 1085 ntBASIC4.64□□□□□ -1.67
SSSCA1O60232 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.64□□□□□ -1.67
SSSCA1O60232 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
SSSCA1O60232 AC117409.1-201ENST00000470499 1310 ntBASIC4.64□□□□□ -1.67
SSSCA1O60232 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SSSCA1O60232 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SSSCA1O60232 GNL2P1-201ENST00000451274 2190 ntBASIC4.64□□□□□ -1.67
SSSCA1O60232 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SSSCA1O60232 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
SSSCA1O60232 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
SSSCA1O60232 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SSSCA1O60232 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
SSSCA1O60232 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SSSCA1O60232 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SSSCA1O60232 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SSSCA1O60232 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC4.63□□□□□ -1.67
SSSCA1O60232 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SSSCA1O60232 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SSSCA1O60232 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SSSCA1O60232 RNU1-134P-201ENST00000362935 165 ntBASIC4.63□□□□□ -1.67
SSSCA1O60232 RNA5SP326-201ENST00000363209 110 ntBASIC4.63□□□□□ -1.67
SSSCA1O60232 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC4.63□□□□□ -1.67
SSSCA1O60232 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SSSCA1O60232 PEX12P1-201ENST00000400284 1048 ntBASIC4.63□□□□□ -1.67
SSSCA1O60232 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.63□□□□□ -1.67
SSSCA1O60232 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC4.63□□□□□ -1.67
SSSCA1O60232 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC4.63□□□□□ -1.67
SSSCA1O60232 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC4.63□□□□□ -1.67
SSSCA1O60232 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC4.63□□□□□ -1.67
SSSCA1O60232 AC130360.1-201ENST00000425489 1117 ntBASIC4.63□□□□□ -1.67
SSSCA1O60232 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.63□□□□□ -1.67
SSSCA1O60232 AC234771.4-201ENST00000441416 730 ntBASIC4.63□□□□□ -1.67
SSSCA1O60232 TRIM60P16-201ENST00000444048 694 ntBASIC4.63□□□□□ -1.67
SSSCA1O60232 AL034369.1-201ENST00000453808 477 ntBASIC4.63□□□□□ -1.67
SSSCA1O60232 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC4.63□□□□□ -1.67
SSSCA1O60232 SNX18P25-201ENST00000510539 758 ntBASIC4.63□□□□□ -1.67
SSSCA1O60232 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC4.63□□□□□ -1.67
SSSCA1O60232 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
SSSCA1O60232 AC130365.2-201ENST00000525882 1201 ntBASIC4.63□□□□□ -1.67
SSSCA1O60232 NPIPB14P-203ENST00000532298 987 ntBASIC4.63□□□□□ -1.67
SSSCA1O60232 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC4.63□□□□□ -1.67
SSSCA1O60232 AC139697.1-201ENST00000548429 745 ntBASIC4.63□□□□□ -1.67
SSSCA1O60232 AC005632.2-201ENST00000564271 828 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms