Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AC106869.1-203ENST00000419035 1892 ntTSL 2 BASIC8.39□□□□□ -1.07
HOXA2O43364 AC107419.1-201ENST00000422048 1879 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
HOXA2O43364 ADA2-204ENST00000399839 3986 ntAPPRIS P3 TSL 5 BASIC8.39□□□□□ -1.07
HOXA2O43364 DCAF13P3-201ENST00000561147 1334 ntBASIC8.39□□□□□ -1.07
HOXA2O43364 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
HOXA2O43364 CCDC15-201ENST00000344762 3893 ntAPPRIS P2 TSL 5 BASIC8.39□□□□□ -1.07
HOXA2O43364 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC8.39□□□□□ -1.07
HOXA2O43364 RNU6-543P-201ENST00000362576 108 ntBASIC8.39□□□□□ -1.07
HOXA2O43364 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
HOXA2O43364 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
HOXA2O43364 RNU6-780P-201ENST00000391030 104 ntBASIC8.39□□□□□ -1.07
HOXA2O43364 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC8.39□□□□□ -1.07
HOXA2O43364 CSE1L-AS1-201ENST00000417781 556 ntTSL 2 BASIC8.39□□□□□ -1.07
HOXA2O43364 DSTNP5-201ENST00000427921 523 ntBASIC8.39□□□□□ -1.07
HOXA2O43364 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC8.39□□□□□ -1.07
HOXA2O43364 RPS19P6-201ENST00000441327 433 ntBASIC8.39□□□□□ -1.07
HOXA2O43364 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC8.39□□□□□ -1.07
HOXA2O43364 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC8.39□□□□□ -1.07
HOXA2O43364 OFD1P4Y-201ENST00000455273 1179 ntBASIC8.39□□□□□ -1.07
HOXA2O43364 AC092757.1-201ENST00000467293 467 ntBASIC8.39□□□□□ -1.07
HOXA2O43364 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC8.39□□□□□ -1.07
HOXA2O43364 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
HOXA2O43364 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC8.39□□□□□ -1.07
HOXA2O43364 RNU6-1045P-201ENST00000516321 107 ntBASIC8.39□□□□□ -1.07
HOXA2O43364 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC8.39□□□□□ -1.07
HOXA2O43364 MTND1P35-201ENST00000526739 508 ntBASIC8.39□□□□□ -1.07
HOXA2O43364 AC087276.1-201ENST00000529659 480 ntBASIC8.39□□□□□ -1.07
HOXA2O43364 ARL2BPP2-201ENST00000550907 489 ntBASIC8.39□□□□□ -1.07
HOXA2O43364 CBX3P5-201ENST00000552017 521 ntBASIC8.39□□□□□ -1.07
HOXA2O43364 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC8.39□□□□□ -1.07
HOXA2O43364 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC8.39□□□□□ -1.07
HOXA2O43364 RPS3AP23-202ENST00000574601 686 ntBASIC8.39□□□□□ -1.07
HOXA2O43364 RN7SL689P-201ENST00000577215 297 ntBASIC8.39□□□□□ -1.07
HOXA2O43364 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC8.39□□□□□ -1.07
HOXA2O43364 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC8.39□□□□□ -1.07
HOXA2O43364 AC073091.2-201ENST00000603205 907 ntBASIC8.39□□□□□ -1.07
HOXA2O43364 AC013553.2-201ENST00000604244 589 ntBASIC8.39□□□□□ -1.07
HOXA2O43364 AC068726.1-201ENST00000610993 341 ntBASIC8.39□□□□□ -1.07
HOXA2O43364 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC8.39□□□□□ -1.07
HOXA2O43364 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
HOXA2O43364 AC114546.4-201ENST00000624413 369 ntBASIC8.39□□□□□ -1.07
HOXA2O43364 AP003400.3-201ENST00000624904 346 ntBASIC8.39□□□□□ -1.07
HOXA2O43364 GON4L-219ENST00000622608 4801 ntTSL 5 BASIC8.39□□□□□ -1.07
HOXA2O43364 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
HOXA2O43364 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC8.39□□□□□ -1.07
HOXA2O43364 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
HOXA2O43364 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
HOXA2O43364 PDIK1L-201ENST00000374269 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
HOXA2O43364 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
HOXA2O43364 ANKFN1-202ENST00000566473 3840 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
HOXA2O43364 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
HOXA2O43364 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
HOXA2O43364 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC8.39□□□□□ -1.07
HOXA2O43364 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC8.39□□□□□ -1.07
HOXA2O43364 CHAF1B-201ENST00000314103 4480 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
HOXA2O43364 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
HOXA2O43364 SOX6-210ENST00000528252 2707 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
HOXA2O43364 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
HOXA2O43364 AC133552.3-201ENST00000572236 1869 ntBASIC8.38□□□□□ -1.07
HOXA2O43364 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
HOXA2O43364 C1orf131-203ENST00000366651 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
HOXA2O43364 AC106872.5-201ENST00000508856 1416 ntBASIC8.38□□□□□ -1.07
HOXA2O43364 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC8.38□□□□□ -1.07
HOXA2O43364 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC8.38□□□□□ -1.07
HOXA2O43364 RASSF5-209ENST00000636182 3427 ntTSL 5 BASIC8.38□□□□□ -1.07
HOXA2O43364 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
HOXA2O43364 ETS1-204ENST00000526145 3389 ntTSL 5 BASIC8.38□□□□□ -1.07
HOXA2O43364 MXI1-203ENST00000361248 2188 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
HOXA2O43364 GUCY2F-201ENST00000218006 3714 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
HOXA2O43364 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
HOXA2O43364 AC006600.2-201ENST00000624834 2506 ntBASIC8.38□□□□□ -1.07
HOXA2O43364 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC8.38□□□□□ -1.07
HOXA2O43364 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
HOXA2O43364 SORBS1-212ENST00000371249 5927 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
HOXA2O43364 RSPO2-203ENST00000517939 2487 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
HOXA2O43364 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC8.38□□□□□ -1.07
HOXA2O43364 MCM10-206ENST00000484800 3157 ntAPPRIS P4 TSL 1 (best) BASIC8.38□□□□□ -1.07
HOXA2O43364 TFDP2-212ENST00000486111 2360 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
HOXA2O43364 Y_RNA.142-201ENST00000363491 102 ntBASIC8.38□□□□□ -1.07
HOXA2O43364 Y_RNA.279-201ENST00000364763 95 ntBASIC8.38□□□□□ -1.07
HOXA2O43364 RNU5E-5P-201ENST00000365379 116 ntBASIC8.38□□□□□ -1.07
HOXA2O43364 RNU2-42P-201ENST00000410697 113 ntBASIC8.38□□□□□ -1.07
HOXA2O43364 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC8.38□□□□□ -1.07
HOXA2O43364 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC8.38□□□□□ -1.07
HOXA2O43364 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC8.38□□□□□ -1.07
HOXA2O43364 MTND2P23-201ENST00000422990 651 ntBASIC8.38□□□□□ -1.07
HOXA2O43364 PPIL1P1-201ENST00000423936 499 ntBASIC8.38□□□□□ -1.07
HOXA2O43364 FDPSP6-201ENST00000425091 512 ntBASIC8.38□□□□□ -1.07
HOXA2O43364 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC8.38□□□□□ -1.07
HOXA2O43364 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC8.38□□□□□ -1.07
HOXA2O43364 PROX1-AS1-203ENST00000451396 476 ntTSL 5 BASIC8.38□□□□□ -1.07
HOXA2O43364 MRPS21P1-201ENST00000453850 223 ntBASIC8.38□□□□□ -1.07
HOXA2O43364 RN7SL388P-201ENST00000498736 339 ntBASIC8.38□□□□□ -1.07
HOXA2O43364 AC022447.3-201ENST00000506865 495 ntBASIC8.38□□□□□ -1.07
HOXA2O43364 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC8.38□□□□□ -1.07
HOXA2O43364 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC8.38□□□□□ -1.07
HOXA2O43364 AC105914.1-201ENST00000511798 226 ntBASIC8.38□□□□□ -1.07
HOXA2O43364 PANCR-202ENST00000513690 448 ntTSL 2 BASIC8.38□□□□□ -1.07
HOXA2O43364 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC8.38□□□□□ -1.07
HOXA2O43364 SERPINA15P-201ENST00000529287 266 ntBASIC8.38□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms