Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
UPK1AO00322 RNU1-65P-201ENST00000363919 148 ntBASIC5.52□□□□□ -1.53
UPK1AO00322 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
UPK1AO00322 RNA5SP431-201ENST00000410312 120 ntBASIC5.52□□□□□ -1.53
UPK1AO00322 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.52□□□□□ -1.53
UPK1AO00322 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.52□□□□□ -1.53
UPK1AO00322 CRIP1P1-201ENST00000427567 185 ntBASIC5.52□□□□□ -1.53
UPK1AO00322 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.52□□□□□ -1.53
UPK1AO00322 AK3P5-201ENST00000432033 519 ntBASIC5.52□□□□□ -1.53
UPK1AO00322 KATNBL1P2-201ENST00000433311 835 ntBASIC5.52□□□□□ -1.53
UPK1AO00322 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
UPK1AO00322 ATP5LP2-201ENST00000440646 311 ntBASIC5.52□□□□□ -1.53
UPK1AO00322 RPL5P25-201ENST00000441148 775 ntBASIC5.52□□□□□ -1.53
UPK1AO00322 PPIAP27-201ENST00000453800 265 ntBASIC5.52□□□□□ -1.53
UPK1AO00322 AC023194.2-201ENST00000465398 406 ntBASIC5.52□□□□□ -1.53
UPK1AO00322 AC079080.1-201ENST00000479841 822 ntBASIC5.52□□□□□ -1.53
UPK1AO00322 LDHAP1-201ENST00000509421 992 ntBASIC5.52□□□□□ -1.53
UPK1AO00322 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.52□□□□□ -1.53
UPK1AO00322 Vault.2-201ENST00000516519 98 ntBASIC5.52□□□□□ -1.53
UPK1AO00322 MIR2117-201ENST00000516780 80 ntBASIC5.52□□□□□ -1.53
UPK1AO00322 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.52□□□□□ -1.53
UPK1AO00322 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.52□□□□□ -1.53
UPK1AO00322 AL121594.2-201ENST00000541658 472 ntBASIC5.52□□□□□ -1.53
UPK1AO00322 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.52□□□□□ -1.53
UPK1AO00322 RPA2P1-201ENST00000556557 721 ntBASIC5.52□□□□□ -1.53
UPK1AO00322 AC026826.3-201ENST00000561747 158 ntBASIC5.52□□□□□ -1.53
UPK1AO00322 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.52□□□□□ -1.53
UPK1AO00322 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC5.52□□□□□ -1.53
UPK1AO00322 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.52□□□□□ -1.53
UPK1AO00322 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.52□□□□□ -1.53
UPK1AO00322 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
UPK1AO00322 MIR6780B-201ENST00000610307 79 ntBASIC5.52□□□□□ -1.53
UPK1AO00322 AC097641.3-201ENST00000613523 464 ntBASIC5.52□□□□□ -1.53
UPK1AO00322 AC245014.3-201ENST00000618589 347 ntBASIC5.52□□□□□ -1.53
UPK1AO00322 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.52□□□□□ -1.53
UPK1AO00322 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.52□□□□□ -1.53
UPK1AO00322 AP001052.1-201ENST00000626421 99 ntBASIC5.52□□□□□ -1.53
UPK1AO00322 TEX41-271ENST00000628213 993 ntTSL 5 BASIC5.52□□□□□ -1.53
UPK1AO00322 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
UPK1AO00322 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.52□□□□□ -1.53
UPK1AO00322 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.52□□□□□ -1.53
UPK1AO00322 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.52□□□□□ -1.53
UPK1AO00322 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.52□□□□□ -1.53
UPK1AO00322 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.52□□□□□ -1.53
UPK1AO00322 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.52□□□□□ -1.53
UPK1AO00322 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.52□□□□□ -1.53
UPK1AO00322 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.52□□□□□ -1.53
UPK1AO00322 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.52□□□□□ -1.53
UPK1AO00322 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
UPK1AO00322 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.51□□□□□ -1.53
UPK1AO00322 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
UPK1AO00322 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
UPK1AO00322 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
UPK1AO00322 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.51□□□□□ -1.53
UPK1AO00322 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
UPK1AO00322 COX6B1P3-201ENST00000312310 260 ntBASIC5.51□□□□□ -1.53
UPK1AO00322 RNFT1P3-201ENST00000340898 1052 ntBASIC5.51□□□□□ -1.53
UPK1AO00322 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.51□□□□□ -1.53
UPK1AO00322 RN7SKP145-201ENST00000363291 303 ntBASIC5.51□□□□□ -1.53
UPK1AO00322 RPS14P4-201ENST00000415880 418 ntBASIC5.51□□□□□ -1.53
UPK1AO00322 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.51□□□□□ -1.53
UPK1AO00322 AC007679.3-201ENST00000434035 414 ntBASIC5.51□□□□□ -1.53
UPK1AO00322 CFL1P4-201ENST00000451536 498 ntBASIC5.51□□□□□ -1.53
UPK1AO00322 GEMIN2P1-201ENST00000454246 752 ntBASIC5.51□□□□□ -1.53
UPK1AO00322 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.51□□□□□ -1.53
UPK1AO00322 OR7E157P-201ENST00000494376 911 ntBASIC5.51□□□□□ -1.53
UPK1AO00322 RPSAP51-201ENST00000497462 645 ntBASIC5.51□□□□□ -1.53
UPK1AO00322 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.51□□□□□ -1.53
UPK1AO00322 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.51□□□□□ -1.53
UPK1AO00322 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.51□□□□□ -1.53
UPK1AO00322 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.51□□□□□ -1.53
UPK1AO00322 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.51□□□□□ -1.53
UPK1AO00322 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.51□□□□□ -1.53
UPK1AO00322 AC006512.2-201ENST00000543250 486 ntBASIC5.51□□□□□ -1.53
UPK1AO00322 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.51□□□□□ -1.53
UPK1AO00322 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.51□□□□□ -1.53
UPK1AO00322 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
UPK1AO00322 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.51□□□□□ -1.53
UPK1AO00322 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.51□□□□□ -1.53
UPK1AO00322 AC002310.3-201ENST00000569728 723 ntBASIC5.51□□□□□ -1.53
UPK1AO00322 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.51□□□□□ -1.53
UPK1AO00322 TXNP4-201ENST00000575018 310 ntBASIC5.51□□□□□ -1.53
UPK1AO00322 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.51□□□□□ -1.53
UPK1AO00322 AC008507.3-201ENST00000585753 472 ntBASIC5.51□□□□□ -1.53
UPK1AO00322 AC090236.2-201ENST00000587933 1101 ntBASIC5.51□□□□□ -1.53
UPK1AO00322 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.51□□□□□ -1.53
UPK1AO00322 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
UPK1AO00322 AL513327.3-201ENST00000602618 469 ntBASIC5.51□□□□□ -1.53
UPK1AO00322 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.51□□□□□ -1.53
UPK1AO00322 AL136131.3-201ENST00000607600 188 ntBASIC5.51□□□□□ -1.53
UPK1AO00322 AC108673.3-201ENST00000609183 335 ntBASIC5.51□□□□□ -1.53
UPK1AO00322 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
UPK1AO00322 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.51□□□□□ -1.53
UPK1AO00322 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.51□□□□□ -1.53
UPK1AO00322 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
UPK1AO00322 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
UPK1AO00322 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC5.51□□□□□ -1.53
UPK1AO00322 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
UPK1AO00322 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.51□□□□□ -1.53
UPK1AO00322 AP002512.4-202ENST00000641599 4530 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms