Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 OSTCP1-201ENST00000455507 450 ntBASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 RPL29P23-201ENST00000486188 442 ntBASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 RPS27P20-201ENST00000492051 246 ntBASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 AC090058.1-201ENST00000498788 435 ntBASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 RNA5SP434-201ENST00000516647 121 ntBASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 AC021269.1-201ENST00000526860 705 ntBASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 AP005136.2-201ENST00000583253 1049 ntBASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 AC025470.1-201ENST00000510053 2032 ntBASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.24□□□□□ -1.57
RHBDD3Q9Y3P4 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 AC087516.1-201ENST00000561236 2428 ntBASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 RNA5SP198-201ENST00000410376 127 ntBASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 RN7SKP166-201ENST00000410812 305 ntBASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 RPSAP32-201ENST00000432681 526 ntBASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 RPL5P10-201ENST00000445207 894 ntBASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 AC124945.1-201ENST00000485133 188 ntBASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 RN7SL612P-201ENST00000497704 295 ntBASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 AC111000.5-201ENST00000506559 1178 ntBASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 ARGFXP2-201ENST00000579304 949 ntBASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 AC119403.2-201ENST00000590960 598 ntBASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 AL135999.3-201ENST00000610501 812 ntBASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 RFPL4AP6-201ENST00000616792 846 ntBASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 AC022325.1-201ENST00000502748 2199 ntBASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.23□□□□□ -1.57
RHBDD3Q9Y3P4 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 AC097461.1-201ENST00000568928 2821 ntBASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 AC133552.1-201ENST00000569988 4007 ntBASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 RNU105B-201ENST00000364478 208 ntBASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 U3.23-201ENST00000391132 200 ntBASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 RN7SKP108-201ENST00000411367 328 ntBASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 AL356968.2-201ENST00000412769 1257 ntBASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 AL096829.1-201ENST00000413677 457 ntBASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 RPS7P8-201ENST00000418311 581 ntBASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 FAM183DP-201ENST00000421987 399 ntBASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 AC099782.1-201ENST00000425889 474 ntBASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 AC073476.1-201ENST00000452854 407 ntBASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 OR7E22P-201ENST00000478335 1035 ntBASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 AC044810.1-201ENST00000480271 711 ntBASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 HMGN1P17-201ENST00000513734 295 ntBASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 snoU109.5-201ENST00000516231 132 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms