Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 MAPK10-338ENST00000641647 3362 ntBASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 AC011933.2-201ENST00000578539 2790 ntBASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 SELENOWP1-201ENST00000322792 252 ntBASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 RNA5SP232-201ENST00000364144 119 ntBASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 VTI1BP4-201ENST00000427516 527 ntBASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 AL354893.1-201ENST00000433735 348 ntBASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 AC138761.5-201ENST00000433967 325 ntBASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 NPM1P18-201ENST00000434232 732 ntBASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 FRG2FP-204ENST00000453982 852 ntBASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 AC021006.1-201ENST00000489849 553 ntBASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 NPM1P28-201ENST00000492269 840 ntBASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 IGKV3D-25-201ENST00000519599 235 ntBASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 AC002519.2-203ENST00000567043 837 ntBASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 AC090826.1-203ENST00000569235 490 ntBASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 MIR4502-201ENST00000580432 81 ntBASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 PARP4P2-201ENST00000446672 3326 ntBASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 AC239868.2-201ENST00000564237 4527 ntBASIC5.69□□□□□ -1.5
RNF11Q9Y3C5 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 RN7SKP81-201ENST00000365603 331 ntBASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 METTL15P3-201ENST00000415522 1221 ntBASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 RPS14P4-201ENST00000415880 418 ntBASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 KIF4CP-201ENST00000422742 1279 ntBASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 GAPDHP75-201ENST00000433910 943 ntBASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 AC096775.1-201ENST00000437724 448 ntBASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 BMS1P10-201ENST00000443754 1120 ntBASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 AC097463.1-201ENST00000447288 481 ntBASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 RPL12P39-201ENST00000455456 496 ntBASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 AC098847.1-201ENST00000473094 348 ntBASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 AC006539.1-201ENST00000481419 501 ntBASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 DEFB109A-201ENST00000482450 265 ntBASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 AC126615.2-201ENST00000553003 515 ntBASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 AL133481.2-203ENST00000607558 139 ntBASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 AC090181.3-201ENST00000624777 1514 ntBASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
RNF11Q9Y3C5 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RNF11Q9Y3C5 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RNF11Q9Y3C5 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RNF11Q9Y3C5 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.67□□□□□ -1.5
RNF11Q9Y3C5 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RNF11Q9Y3C5 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RNF11Q9Y3C5 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RNF11Q9Y3C5 RN7SKP78-201ENST00000364711 318 ntBASIC5.67□□□□□ -1.5
RNF11Q9Y3C5 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RNF11Q9Y3C5 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RNF11Q9Y3C5 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.67□□□□□ -1.5
RNF11Q9Y3C5 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms