Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 AC010266.2-201ENST00000564741 3255 ntBASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 RNA5SP110-201ENST00000362638 115 ntBASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 RNA5SP232-201ENST00000364144 119 ntBASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 MYL6P5-201ENST00000412707 459 ntBASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 MED28P3-201ENST00000444288 531 ntBASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 RBMY2AP-201ENST00000445405 1157 ntBASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 ZNF619P1-201ENST00000446539 752 ntBASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 FTLP8-201ENST00000446770 267 ntBASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 RBMY2CP-201ENST00000448575 1157 ntBASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 RBMY2DP-202ENST00000448881 1157 ntBASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 AC068491.1-201ENST00000449539 1241 ntBASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 RBMY2BP-202ENST00000451071 1156 ntBASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 RN7SL649P-201ENST00000496974 275 ntBASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 CCDC11P1-201ENST00000503137 1162 ntBASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 AC084121.1-201ENST00000533882 835 ntBASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 AC007346.1-201ENST00000569208 867 ntBASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 AL683826.1-201ENST00000624104 627 ntBASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 TEX41-271ENST00000628213 993 ntTSL 5 BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 DNM1P47-203ENST00000571780 12667 ntBASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 AC104966.1-201ENST00000467010 1464 ntBASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 TCP11X1-202ENST00000622971 1372 ntBASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 MTCO1P28-201ENST00000574177 1528 ntBASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 AC005224.3-201ENST00000584683 2140 ntBASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 AL132875.1-201ENST00000403623 949 ntBASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 MIR1275-201ENST00000408770 80 ntBASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 AC117434.1-201ENST00000419971 836 ntBASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 AL354893.1-201ENST00000433735 348 ntBASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 SERPINA7P1-201ENST00000443077 631 ntBASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 AC073072.2-201ENST00000447425 348 ntBASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 AC016027.4-201ENST00000450866 277 ntBASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 AC124945.1-201ENST00000485133 188 ntBASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 GLUD1P3-202ENST00000508551 200 ntBASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 AP004609.2-201ENST00000532177 190 ntBASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms