Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 AL445665.1-202ENST00000452436 324 ntBASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 NXT1P1-201ENST00000458481 316 ntBASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 PPIAP19-201ENST00000486414 492 ntBASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 RPL17P2-201ENST00000491913 451 ntBASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 MTATP6P1-201ENST00000514057 681 ntBASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 AC007494.1-201ENST00000562293 760 ntBASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 uc_338.26-201ENST00000612659 160 ntBASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 AC127024.6-201ENST00000621598 424 ntBASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 AP001885.1-201ENST00000621658 558 ntBASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 AC015689.2-201ENST00000528172 1738 ntBASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 PDZK1P1-202ENST00000425209 1350 ntBASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 WDR95P-201ENST00000425638 1542 ntBASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 OR13C1P-202ENST00000641378 2919 ntBASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 AC015977.1-201ENST00000418887 292 ntBASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 AC099677.3-201ENST00000427081 395 ntBASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 RPSAP41-201ENST00000439695 860 ntBASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 RPL31P15-201ENST00000449770 338 ntBASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 AC128716.1-201ENST00000475129 166 ntBASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 RN7SL57P-201ENST00000493687 290 ntBASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 AC104109.1-201ENST00000498563 436 ntBASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 GAPDHP71-201ENST00000511530 1003 ntBASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 OR7E158P-201ENST00000524483 910 ntBASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 OR4A42P-201ENST00000531397 938 ntBASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 AC090651.1-201ENST00000567865 634 ntBASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 AC004890.3-201ENST00000605566 1095 ntBASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 MIR6862-1-201ENST00000613016 70 ntBASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 MIR6862-2-201ENST00000614755 70 ntBASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 AC106872.5-201ENST00000508856 1416 ntBASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 AC093297.3-201ENST00000607056 2517 ntBASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 NEPNP-201ENST00000404786 1371 ntBASIC5.29□□□□□ -1.56
CLCF1Q9UBD9 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 PARP4P2-201ENST00000446672 3326 ntBASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 NCOA4P2-201ENST00000340589 1813 ntBASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 MIR375-201ENST00000362103 64 ntBASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 RN7SKP69-201ENST00000365390 305 ntBASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 RPS4XP5-201ENST00000419038 768 ntBASIC5.28□□□□□ -1.56
CLCF1Q9UBD9 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms