Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.09□□□□□ -1.28
VTA1Q9NP79 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
VTA1Q9NP79 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
VTA1Q9NP79 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
VTA1Q9NP79 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
VTA1Q9NP79 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
VTA1Q9NP79 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
VTA1Q9NP79 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
VTA1Q9NP79 CCAT2-201ENST00000630920 1752 ntBASIC7.08□□□□□ -1.28
VTA1Q9NP79 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
VTA1Q9NP79 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
VTA1Q9NP79 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
VTA1Q9NP79 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.08□□□□□ -1.28
VTA1Q9NP79 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
VTA1Q9NP79 RNA5SP350-201ENST00000363298 111 ntBASIC7.08□□□□□ -1.28
VTA1Q9NP79 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
VTA1Q9NP79 AC069282.1-201ENST00000411911 526 ntBASIC7.08□□□□□ -1.28
VTA1Q9NP79 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
VTA1Q9NP79 AC092570.3-201ENST00000420113 693 ntBASIC7.08□□□□□ -1.28
VTA1Q9NP79 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC7.08□□□□□ -1.28
VTA1Q9NP79 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC7.08□□□□□ -1.28
VTA1Q9NP79 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7.08□□□□□ -1.28
VTA1Q9NP79 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7.08□□□□□ -1.28
VTA1Q9NP79 CFL1P4-201ENST00000451536 498 ntBASIC7.08□□□□□ -1.28
VTA1Q9NP79 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC7.08□□□□□ -1.28
VTA1Q9NP79 HLA-DPA3-207ENST00000454398 229 ntBASIC7.08□□□□□ -1.28
VTA1Q9NP79 SETP20-201ENST00000457046 852 ntBASIC7.08□□□□□ -1.28
VTA1Q9NP79 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC7.08□□□□□ -1.28
VTA1Q9NP79 AP001858.2-201ENST00000536213 601 ntBASIC7.08□□□□□ -1.28
VTA1Q9NP79 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC7.08□□□□□ -1.28
VTA1Q9NP79 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC7.08□□□□□ -1.28
VTA1Q9NP79 AL158211.1-201ENST00000566763 763 ntBASIC7.08□□□□□ -1.28
VTA1Q9NP79 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC7.08□□□□□ -1.28
VTA1Q9NP79 AC012146.2-201ENST00000576545 416 ntBASIC7.08□□□□□ -1.28
VTA1Q9NP79 MIR3614-201ENST00000581261 86 ntBASIC7.08□□□□□ -1.28
VTA1Q9NP79 AC005242.1-201ENST00000585658 438 ntBASIC7.08□□□□□ -1.28
VTA1Q9NP79 AC139493.1-201ENST00000604368 397 ntBASIC7.08□□□□□ -1.28
VTA1Q9NP79 AP004372.1-201ENST00000604842 844 ntBASIC7.08□□□□□ -1.28
VTA1Q9NP79 AC034236.3-201ENST00000605999 461 ntBASIC7.08□□□□□ -1.28
VTA1Q9NP79 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC7.08□□□□□ -1.28
VTA1Q9NP79 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC7.08□□□□□ -1.28
VTA1Q9NP79 AC245014.3-201ENST00000618589 347 ntBASIC7.08□□□□□ -1.28
VTA1Q9NP79 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
VTA1Q9NP79 CYP2G2P-201ENST00000594920 1485 ntBASIC7.08□□□□□ -1.28
VTA1Q9NP79 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
VTA1Q9NP79 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
VTA1Q9NP79 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
VTA1Q9NP79 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
VTA1Q9NP79 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
VTA1Q9NP79 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
VTA1Q9NP79 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
VTA1Q9NP79 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
VTA1Q9NP79 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
VTA1Q9NP79 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
VTA1Q9NP79 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC7.08□□□□□ -1.28
VTA1Q9NP79 CA1-225ENST00000626824 2405 ntTSL 5 BASIC7.08□□□□□ -1.28
VTA1Q9NP79 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
VTA1Q9NP79 ST7-203ENST00000393443 2360 ntTSL 2 BASIC7.08□□□□□ -1.28
VTA1Q9NP79 AC010168.2-201ENST00000562691 5428 ntBASIC7.07□□□□□ -1.28
VTA1Q9NP79 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
VTA1Q9NP79 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
VTA1Q9NP79 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.07□□□□□ -1.28
VTA1Q9NP79 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.07□□□□□ -1.28
VTA1Q9NP79 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
VTA1Q9NP79 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
VTA1Q9NP79 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
VTA1Q9NP79 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.07□□□□□ -1.28
VTA1Q9NP79 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
VTA1Q9NP79 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
VTA1Q9NP79 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
VTA1Q9NP79 OR4K17-201ENST00000315543 1032 ntBASIC7.07□□□□□ -1.28
VTA1Q9NP79 RNU1-49P-201ENST00000363468 159 ntBASIC7.07□□□□□ -1.28
VTA1Q9NP79 RNU6-792P-201ENST00000363490 107 ntBASIC7.07□□□□□ -1.28
VTA1Q9NP79 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
VTA1Q9NP79 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
VTA1Q9NP79 AC007068.1-201ENST00000396690 844 ntBASIC7.07□□□□□ -1.28
VTA1Q9NP79 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC7.07□□□□□ -1.28
VTA1Q9NP79 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC7.07□□□□□ -1.28
VTA1Q9NP79 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
VTA1Q9NP79 AC104843.2-201ENST00000427666 297 ntBASIC7.07□□□□□ -1.28
VTA1Q9NP79 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC7.07□□□□□ -1.28
VTA1Q9NP79 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
VTA1Q9NP79 AC242426.1-201ENST00000435270 960 ntBASIC7.07□□□□□ -1.28
VTA1Q9NP79 KRTAP2-5P-201ENST00000446109 396 ntBASIC7.07□□□□□ -1.28
VTA1Q9NP79 MTATP6P14-201ENST00000455189 673 ntBASIC7.07□□□□□ -1.28
VTA1Q9NP79 AC105918.1-201ENST00000474399 838 ntBASIC7.07□□□□□ -1.28
VTA1Q9NP79 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC7.07□□□□□ -1.28
VTA1Q9NP79 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC7.07□□□□□ -1.28
VTA1Q9NP79 AC104109.1-201ENST00000498563 436 ntBASIC7.07□□□□□ -1.28
VTA1Q9NP79 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC7.07□□□□□ -1.28
VTA1Q9NP79 AC006499.4-201ENST00000510947 694 ntBASIC7.07□□□□□ -1.28
VTA1Q9NP79 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC7.07□□□□□ -1.28
VTA1Q9NP79 IGKV1OR22-1-201ENST00000521497 360 ntBASIC7.07□□□□□ -1.28
VTA1Q9NP79 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC7.07□□□□□ -1.28
VTA1Q9NP79 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC7.07□□□□□ -1.28
VTA1Q9NP79 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC7.07□□□□□ -1.28
VTA1Q9NP79 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC7.07□□□□□ -1.28
VTA1Q9NP79 RPA2P1-201ENST00000556557 721 ntBASIC7.07□□□□□ -1.28
VTA1Q9NP79 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC7.07□□□□□ -1.28
VTA1Q9NP79 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms