Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC6.38□□□□□ -1.39
USP29Q9HBJ7 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC6.38□□□□□ -1.39
USP29Q9HBJ7 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC6.38□□□□□ -1.39
USP29Q9HBJ7 MTND3P24-201ENST00000506306 329 ntBASIC6.38□□□□□ -1.39
USP29Q9HBJ7 RNA5SP206-201ENST00000516703 121 ntBASIC6.38□□□□□ -1.39
USP29Q9HBJ7 AC008429.4-201ENST00000521201 182 ntBASIC6.38□□□□□ -1.39
USP29Q9HBJ7 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.38□□□□□ -1.39
USP29Q9HBJ7 NPIPB14P-203ENST00000532298 987 ntBASIC6.38□□□□□ -1.39
USP29Q9HBJ7 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.38□□□□□ -1.39
USP29Q9HBJ7 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.38□□□□□ -1.39
USP29Q9HBJ7 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC6.38□□□□□ -1.39
USP29Q9HBJ7 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.38□□□□□ -1.39
USP29Q9HBJ7 AC005632.2-201ENST00000564271 828 ntBASIC6.38□□□□□ -1.39
USP29Q9HBJ7 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC6.38□□□□□ -1.39
USP29Q9HBJ7 DYNLL1P1-201ENST00000595442 269 ntBASIC6.38□□□□□ -1.39
USP29Q9HBJ7 AL139022.2-201ENST00000606934 443 ntBASIC6.38□□□□□ -1.39
USP29Q9HBJ7 AC135803.1-201ENST00000608748 565 ntBASIC6.38□□□□□ -1.39
USP29Q9HBJ7 AL136097.3-201ENST00000611097 505 ntBASIC6.38□□□□□ -1.39
USP29Q9HBJ7 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC6.38□□□□□ -1.39
USP29Q9HBJ7 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.38□□□□□ -1.39
USP29Q9HBJ7 AL357140.4-201ENST00000636827 412 ntBASIC6.38□□□□□ -1.39
USP29Q9HBJ7 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
USP29Q9HBJ7 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USP29Q9HBJ7 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USP29Q9HBJ7 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.38□□□□□ -1.39
USP29Q9HBJ7 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USP29Q9HBJ7 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.38□□□□□ -1.39
USP29Q9HBJ7 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USP29Q9HBJ7 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USP29Q9HBJ7 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.38□□□□□ -1.39
USP29Q9HBJ7 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USP29Q9HBJ7 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 THAP12P8-201ENST00000447914 2115 ntBASIC6.37□□□□□ -1.39
USP29Q9HBJ7 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 RNU1-49P-201ENST00000363468 159 ntBASIC6.37□□□□□ -1.39
USP29Q9HBJ7 SNORA43.1-201ENST00000364863 140 ntBASIC6.37□□□□□ -1.39
USP29Q9HBJ7 AL121835.1-201ENST00000404250 354 ntBASIC6.37□□□□□ -1.39
USP29Q9HBJ7 AL589655.1-201ENST00000405398 482 ntBASIC6.37□□□□□ -1.39
USP29Q9HBJ7 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 AC092865.3-201ENST00000425390 1026 ntBASIC6.37□□□□□ -1.39
USP29Q9HBJ7 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 AC112492.2-201ENST00000432774 1030 ntBASIC6.37□□□□□ -1.39
USP29Q9HBJ7 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 AL691517.1-201ENST00000440833 1235 ntBASIC6.37□□□□□ -1.39
USP29Q9HBJ7 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 GAPDHP23-201ENST00000444823 993 ntBASIC6.37□□□□□ -1.39
USP29Q9HBJ7 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 RPL7L1P3-201ENST00000455249 689 ntBASIC6.37□□□□□ -1.39
USP29Q9HBJ7 AC112187.1-201ENST00000455837 479 ntBASIC6.37□□□□□ -1.39
USP29Q9HBJ7 RPL31P53-201ENST00000457065 348 ntBASIC6.37□□□□□ -1.39
USP29Q9HBJ7 AC009963.3-201ENST00000458090 486 ntBASIC6.37□□□□□ -1.39
USP29Q9HBJ7 AC094085.1-201ENST00000468914 584 ntBASIC6.37□□□□□ -1.39
USP29Q9HBJ7 AL355032.1-201ENST00000472981 438 ntBASIC6.37□□□□□ -1.39
USP29Q9HBJ7 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 OR4D12P-201ENST00000509361 911 ntBASIC6.37□□□□□ -1.39
USP29Q9HBJ7 CYP4F27P-201ENST00000514557 494 ntBASIC6.37□□□□□ -1.39
USP29Q9HBJ7 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 AC110792.4-201ENST00000609843 298 ntBASIC6.37□□□□□ -1.39
USP29Q9HBJ7 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.37□□□□□ -1.39
USP29Q9HBJ7 AP001962.1-201ENST00000624114 559 ntBASIC6.37□□□□□ -1.39
USP29Q9HBJ7 AC006453.5-201ENST00000636451 619 ntBASIC6.37□□□□□ -1.39
USP29Q9HBJ7 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.37□□□□□ -1.39
USP29Q9HBJ7 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.36□□□□□ -1.39
USP29Q9HBJ7 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
USP29Q9HBJ7 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
USP29Q9HBJ7 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 203.7 ms