Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 TCF4-207ENST00000540999 2572 ntTSL 2 BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 Y_RNA.132-201ENST00000363421 102 ntBASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 VTRNA1-2-201ENST00000365241 89 ntBASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 THEM5-201ENST00000368817 984 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 LCN1P2-201ENST00000372030 223 ntBASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 AL031985.1-201ENST00000392713 418 ntBASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 H2AFZP3-201ENST00000394213 387 ntBASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 RPS15AP38-201ENST00000413110 372 ntBASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 OFD1P2Y-201ENST00000421895 1149 ntBASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 SAR1AP4-201ENST00000429225 591 ntBASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 GAPDHP59-201ENST00000435908 267 ntBASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 GCNT1P5-201ENST00000449274 682 ntBASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 AC009229.1-201ENST00000450854 622 ntTSL 4 BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 ATP5A1P7-201ENST00000453978 1279 ntBASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 AC010878.1-201ENST00000456500 1047 ntBASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 CREM-224ENST00000468236 582 ntTSL 3 BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 DLEU1-212ENST00000469754 2955 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 RPL7P18-201ENST00000478965 734 ntBASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 RN7SL362P-201ENST00000494228 267 ntBASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 AC091133.4-201ENST00000511142 308 ntBASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 DCAF13P2-201ENST00000514188 555 ntBASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 RN7SKP141-201ENST00000516167 338 ntBASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 AC027544.3-201ENST00000535082 757 ntBASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 AC093027.1-201ENST00000546698 429 ntBASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 AC048383.1-201ENST00000558226 527 ntTSL 4 BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 ULK4P2-202ENST00000564187 492 ntBASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 AL359715.3-201ENST00000569267 2123 ntBASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 VN1R79P-201ENST00000593540 513 ntBASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 VN1R81P-201ENST00000602085 372 ntBASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 AP001267.4-201ENST00000602598 545 ntBASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 AL096712.1-201ENST00000614561 159 ntBASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 AL158209.2-201ENST00000619266 216 ntBASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 RN7SL680P-201ENST00000620379 299 ntBASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 AC078909.2-201ENST00000620584 398 ntBASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 7SK.10-201ENST00000621414 298 ntBASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 OR13D1-202ENST00000641530 945 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 BCOR-203ENST00000378455 6338 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 FAM13C-217ENST00000618804 3333 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 DHX29-201ENST00000251636 4502 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 ERBB3-213ENST00000549832 3289 ntTSL 2 BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 SPATA31D5P-201ENST00000376459 4784 ntBASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 NLRP3-204ENST00000366497 4318 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 FOXR2-201ENST00000339140 1926 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 RBM18-201ENST00000417201 4974 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 PSG10P-201ENST00000501199 1500 ntBASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 CLRN1-AS1-202ENST00000476886 2223 ntTSL 2 BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 BACE1-202ENST00000392937 5155 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 KRT23-202ENST00000436344 1485 ntTSL 2 BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 MYO1H-201ENST00000310903 4364 ntTSL 5 BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 CD22-201ENST00000085219 3268 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 CAPN3-206ENST00000397163 3228 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 ACSBG2-206ENST00000588485 2478 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 DCTN4-203ENST00000447998 4208 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 MYH2-206ENST00000622564 2379 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 IL5RA-206ENST00000430514 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 TPM1-233ENST00000610733 3957 ntTSL 2 BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 LINC02128-205ENST00000641755 1334 ntBASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 MMP20-201ENST00000260228 1956 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 TCF4-241ENST00000568740 2628 ntTSL 5 BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 CU633906.2-201ENST00000624576 2257 ntTSL 5 BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 HSP90AB1-201ENST00000353801 2582 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 ENTPD1-203ENST00000371207 1903 ntTSL 2 BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms