Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 FGA-202ENST00000403106 2248 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
PHOX2BQ99453 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC8.35□□□□□ -1.07
PHOX2BQ99453 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC8.35□□□□□ -1.07
PHOX2BQ99453 OR7E122P-202ENST00000641144 6171 ntBASIC8.35□□□□□ -1.07
PHOX2BQ99453 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC8.35□□□□□ -1.07
PHOX2BQ99453 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
PHOX2BQ99453 OR4K17-202ENST00000641386 4886 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
PHOX2BQ99453 MKL2-205ENST00000572567 2185 ntTSL 2 BASIC8.35□□□□□ -1.07
PHOX2BQ99453 CCT4P2-201ENST00000233836 1548 ntBASIC8.35□□□□□ -1.07
PHOX2BQ99453 CLOCK-202ENST00000381322 4059 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PHOX2BQ99453 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PHOX2BQ99453 AC005520.1-201ENST00000556551 3695 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
PHOX2BQ99453 ZNF215-202ENST00000414517 3257 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
PHOX2BQ99453 LINC00927-203ENST00000558913 2878 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
PHOX2BQ99453 AC097375.3-201ENST00000515329 2652 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
PHOX2BQ99453 PPWD1-215ENST00000538977 2055 ntTSL 2 BASIC8.35□□□□□ -1.07
PHOX2BQ99453 ZNF714-210ENST00000620627 2066 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
PHOX2BQ99453 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC8.35□□□□□ -1.07
PHOX2BQ99453 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC8.35□□□□□ -1.07
PHOX2BQ99453 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
PHOX2BQ99453 NAP1L4P1-201ENST00000319092 1157 ntBASIC8.35□□□□□ -1.07
PHOX2BQ99453 FAM107B-202ENST00000378458 1284 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
PHOX2BQ99453 OR52E6-202ENST00000379946 954 ntBASIC8.35□□□□□ -1.07
PHOX2BQ99453 RNU6-533P-201ENST00000384144 107 ntBASIC8.35□□□□□ -1.07
PHOX2BQ99453 SNORA51.12-201ENST00000384448 134 ntBASIC8.35□□□□□ -1.07
PHOX2BQ99453 AC096664.1-201ENST00000393996 778 ntBASIC8.35□□□□□ -1.07
PHOX2BQ99453 SNORD3J-201ENST00000408473 190 ntBASIC8.35□□□□□ -1.07
PHOX2BQ99453 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC8.35□□□□□ -1.07
PHOX2BQ99453 AL139128.1-201ENST00000413921 941 ntBASIC8.35□□□□□ -1.07
PHOX2BQ99453 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC8.35□□□□□ -1.07
PHOX2BQ99453 TEX41-204ENST00000423031 491 ntTSL 4 BASIC8.35□□□□□ -1.07
PHOX2BQ99453 AL353729.1-201ENST00000425044 720 ntBASIC8.35□□□□□ -1.07
PHOX2BQ99453 NIPA2P1-201ENST00000426223 976 ntBASIC8.35□□□□□ -1.07
PHOX2BQ99453 DPY19L1P2-201ENST00000426647 915 ntBASIC8.35□□□□□ -1.07
PHOX2BQ99453 AC109583.1-201ENST00000432156 268 ntBASIC8.35□□□□□ -1.07
PHOX2BQ99453 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC8.35□□□□□ -1.07
PHOX2BQ99453 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC8.35□□□□□ -1.07
PHOX2BQ99453 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC8.35□□□□□ -1.07
PHOX2BQ99453 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC8.35□□□□□ -1.07
PHOX2BQ99453 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC8.35□□□□□ -1.07
PHOX2BQ99453 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC8.35□□□□□ -1.07
PHOX2BQ99453 FAM172BP-201ENST00000487497 1089 ntBASIC8.35□□□□□ -1.07
PHOX2BQ99453 AC022973.1-201ENST00000490340 575 ntBASIC8.35□□□□□ -1.07
PHOX2BQ99453 RN7SL649P-201ENST00000496974 275 ntBASIC8.35□□□□□ -1.07
PHOX2BQ99453 LINC00491-201ENST00000505527 722 ntTSL 3 BASIC8.35□□□□□ -1.07
PHOX2BQ99453 RPS23-208ENST00000512493 443 ntTSL 3 BASIC8.35□□□□□ -1.07
PHOX2BQ99453 SNORA19.2-201ENST00000516013 114 ntBASIC8.35□□□□□ -1.07
PHOX2BQ99453 AP003467.2-201ENST00000520175 319 ntBASIC8.35□□□□□ -1.07
PHOX2BQ99453 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC8.35□□□□□ -1.07
PHOX2BQ99453 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC8.35□□□□□ -1.07
PHOX2BQ99453 KDM1B-203ENST00000546309 496 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
PHOX2BQ99453 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC8.35□□□□□ -1.07
PHOX2BQ99453 AL845331.3-202ENST00000562856 261 ntBASIC8.35□□□□□ -1.07
PHOX2BQ99453 PRKAR1A-214ENST00000588188 1209 ntTSL 3 BASIC8.35□□□□□ -1.07
PHOX2BQ99453 TBX18-AS1-208ENST00000591225 762 ntTSL 5 BASIC8.35□□□□□ -1.07
PHOX2BQ99453 AP001437.1-201ENST00000608783 456 ntBASIC8.35□□□□□ -1.07
PHOX2BQ99453 AC243756.2-201ENST00000618406 463 ntBASIC8.35□□□□□ -1.07
PHOX2BQ99453 AL121985.2-201ENST00000621192 555 ntBASIC8.35□□□□□ -1.07
PHOX2BQ99453 AC129778.1-202ENST00000623812 261 ntBASIC8.35□□□□□ -1.07
PHOX2BQ99453 AL591379.1-207ENST00000635982 261 ntBASIC8.35□□□□□ -1.07
PHOX2BQ99453 AMYH02020865.1-205ENST00000636189 261 ntBASIC8.35□□□□□ -1.07
PHOX2BQ99453 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC8.35□□□□□ -1.07
PHOX2BQ99453 OPTN-202ENST00000378747 3400 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
PHOX2BQ99453 USP32P1-201ENST00000341745 3233 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
PHOX2BQ99453 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PHOX2BQ99453 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC8.35□□□□□ -1.07
PHOX2BQ99453 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC8.35□□□□□ -1.07
PHOX2BQ99453 ADGRB3-202ENST00000370598 6010 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PHOX2BQ99453 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PHOX2BQ99453 EIF4ENIF1-201ENST00000330125 3544 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PHOX2BQ99453 PUM1-203ENST00000373742 3515 ntTSL 2 BASIC8.35□□□□□ -1.07
PHOX2BQ99453 HRH2-204ENST00000636584 4067 ntTSL 3 BASIC8.35□□□□□ -1.07
PHOX2BQ99453 WDR31-203ENST00000374195 3101 ntAPPRIS P3 TSL 5 BASIC8.35□□□□□ -1.07
PHOX2BQ99453 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PHOX2BQ99453 BMX-202ENST00000348343 2531 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PHOX2BQ99453 MAP9-201ENST00000311277 7333 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PHOX2BQ99453 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC8.35□□□□□ -1.07
PHOX2BQ99453 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC8.35□□□□□ -1.07
PHOX2BQ99453 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC8.35□□□□□ -1.07
PHOX2BQ99453 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC8.34□□□□□ -1.07
PHOX2BQ99453 NUCB2-208ENST00000529010 2274 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
PHOX2BQ99453 LINC00662-203ENST00000586954 2254 ntTSL 2 BASIC8.34□□□□□ -1.07
PHOX2BQ99453 AC073525.1-203ENST00000547040 2631 ntTSL 2 BASIC8.34□□□□□ -1.07
PHOX2BQ99453 UAP1-202ENST00000367924 2066 ntAPPRIS ALT1 TSL 5 BASIC8.34□□□□□ -1.07
PHOX2BQ99453 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
PHOX2BQ99453 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC8.34□□□□□ -1.07
PHOX2BQ99453 AC055716.2-201ENST00000552545 2441 ntBASIC8.34□□□□□ -1.07
PHOX2BQ99453 MTF2-214ENST00000545708 4046 ntTSL 2 BASIC8.34□□□□□ -1.07
PHOX2BQ99453 MTIF2-203ENST00000394600 2221 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
PHOX2BQ99453 CDK15-203ENST00000434439 2240 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PHOX2BQ99453 INSIG2-201ENST00000245787 2590 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
PHOX2BQ99453 HNRNPK-205ENST00000376281 2928 ntAPPRIS P4 TSL 1 (best) BASIC8.34□□□□□ -1.07
PHOX2BQ99453 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
PHOX2BQ99453 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PHOX2BQ99453 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
PHOX2BQ99453 LARP1B-202ENST00000394288 2151 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PHOX2BQ99453 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC8.34□□□□□ -1.07
PHOX2BQ99453 ZFP2-205ENST00000523286 2154 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
PHOX2BQ99453 CRB1-210ENST00000538660 3397 ntTSL 2 BASIC8.34□□□□□ -1.07
PHOX2BQ99453 USP48-203ENST00000374732 3037 ntTSL 2 BASIC8.34□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms