Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 MIR7854-201ENST00000620068 65 ntBASIC5.89□□□□□ -1.47
SNX18Q96RF0 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.89□□□□□ -1.47
SNX18Q96RF0 AC006328.2-201ENST00000623198 397 ntBASIC5.89□□□□□ -1.47
SNX18Q96RF0 AC012005.2-201ENST00000624333 397 ntBASIC5.89□□□□□ -1.47
SNX18Q96RF0 AL035425.4-201ENST00000624509 1063 ntBASIC5.89□□□□□ -1.47
SNX18Q96RF0 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC5.89□□□□□ -1.47
SNX18Q96RF0 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.89□□□□□ -1.47
SNX18Q96RF0 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
SNX18Q96RF0 PSMC1P6-201ENST00000477233 1319 ntBASIC5.89□□□□□ -1.47
SNX18Q96RF0 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.89□□□□□ -1.47
SNX18Q96RF0 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SNX18Q96RF0 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.89□□□□□ -1.47
SNX18Q96RF0 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SNX18Q96RF0 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
SNX18Q96RF0 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SNX18Q96RF0 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SNX18Q96RF0 SAMM50P1-201ENST00000455403 1399 ntBASIC5.89□□□□□ -1.47
SNX18Q96RF0 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SNX18Q96RF0 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
SNX18Q96RF0 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
SNX18Q96RF0 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.89□□□□□ -1.47
SNX18Q96RF0 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
SNX18Q96RF0 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.89□□□□□ -1.47
SNX18Q96RF0 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.88□□□□□ -1.47
SNX18Q96RF0 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SNX18Q96RF0 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.88□□□□□ -1.47
SNX18Q96RF0 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SNX18Q96RF0 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
SNX18Q96RF0 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
SNX18Q96RF0 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.88□□□□□ -1.47
SNX18Q96RF0 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.88□□□□□ -1.47
SNX18Q96RF0 CASC19-260ENST00000641828 2001 ntBASIC5.88□□□□□ -1.47
SNX18Q96RF0 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.88□□□□□ -1.47
SNX18Q96RF0 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
SNX18Q96RF0 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SNX18Q96RF0 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SNX18Q96RF0 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SNX18Q96RF0 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC5.88□□□□□ -1.47
SNX18Q96RF0 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SNX18Q96RF0 RPL23AP17-201ENST00000401064 499 ntBASIC5.88□□□□□ -1.47
SNX18Q96RF0 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.88□□□□□ -1.47
SNX18Q96RF0 AL929472.1-201ENST00000417484 429 ntBASIC5.88□□□□□ -1.47
SNX18Q96RF0 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.88□□□□□ -1.47
SNX18Q96RF0 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC5.88□□□□□ -1.47
SNX18Q96RF0 GAPDHP75-201ENST00000433910 943 ntBASIC5.88□□□□□ -1.47
SNX18Q96RF0 AC096632.2-201ENST00000438139 1239 ntBASIC5.88□□□□□ -1.47
SNX18Q96RF0 RPL5P10-201ENST00000445207 894 ntBASIC5.88□□□□□ -1.47
SNX18Q96RF0 RPL23AP64-201ENST00000469465 435 ntBASIC5.88□□□□□ -1.47
SNX18Q96RF0 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
SNX18Q96RF0 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC5.88□□□□□ -1.47
SNX18Q96RF0 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SNX18Q96RF0 AK4P6-201ENST00000505168 528 ntBASIC5.88□□□□□ -1.47
SNX18Q96RF0 MTCO1P31-201ENST00000506355 492 ntBASIC5.88□□□□□ -1.47
SNX18Q96RF0 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.88□□□□□ -1.47
SNX18Q96RF0 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC5.88□□□□□ -1.47
SNX18Q96RF0 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC5.88□□□□□ -1.47
SNX18Q96RF0 AP003355.1-201ENST00000518956 587 ntBASIC5.88□□□□□ -1.47
SNX18Q96RF0 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.88□□□□□ -1.47
SNX18Q96RF0 HMGB1P46-201ENST00000520062 610 ntBASIC5.88□□□□□ -1.47
SNX18Q96RF0 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SNX18Q96RF0 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.88□□□□□ -1.47
SNX18Q96RF0 MTND3P12-201ENST00000559068 328 ntBASIC5.88□□□□□ -1.47
SNX18Q96RF0 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.88□□□□□ -1.47
SNX18Q96RF0 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.88□□□□□ -1.47
SNX18Q96RF0 AC005242.1-201ENST00000585658 438 ntBASIC5.88□□□□□ -1.47
SNX18Q96RF0 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC5.88□□□□□ -1.47
SNX18Q96RF0 AC093635.1-201ENST00000609028 555 ntBASIC5.88□□□□□ -1.47
SNX18Q96RF0 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.88□□□□□ -1.47
SNX18Q96RF0 AL136097.3-201ENST00000611097 505 ntBASIC5.88□□□□□ -1.47
SNX18Q96RF0 MIR1264-201ENST00000616374 69 ntBASIC5.88□□□□□ -1.47
SNX18Q96RF0 AC108359.1-201ENST00000616451 1211 ntBASIC5.88□□□□□ -1.47
SNX18Q96RF0 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SNX18Q96RF0 AC004777.1-201ENST00000624317 287 ntBASIC5.88□□□□□ -1.47
SNX18Q96RF0 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.88□□□□□ -1.47
SNX18Q96RF0 NEK2P2-201ENST00000438441 1338 ntBASIC5.88□□□□□ -1.47
SNX18Q96RF0 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.88□□□□□ -1.47
SNX18Q96RF0 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
SNX18Q96RF0 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SNX18Q96RF0 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.88□□□□□ -1.47
SNX18Q96RF0 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
SNX18Q96RF0 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SNX18Q96RF0 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SNX18Q96RF0 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
SNX18Q96RF0 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC5.88□□□□□ -1.47
SNX18Q96RF0 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SNX18Q96RF0 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SNX18Q96RF0 UGT2B24P-201ENST00000514441 1597 ntBASIC5.88□□□□□ -1.47
SNX18Q96RF0 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SNX18Q96RF0 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SNX18Q96RF0 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SNX18Q96RF0 OR10AB1P-202ENST00000641219 1686 ntBASIC5.88□□□□□ -1.47
SNX18Q96RF0 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SNX18Q96RF0 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.88□□□□□ -1.47
SNX18Q96RF0 AC105235.1-201ENST00000623208 1816 ntBASIC5.88□□□□□ -1.47
SNX18Q96RF0 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SNX18Q96RF0 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.88□□□□□ -1.47
SNX18Q96RF0 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SNX18Q96RF0 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SNX18Q96RF0 AC139426.3-201ENST00000605648 2059 ntBASIC5.87□□□□□ -1.47
SNX18Q96RF0 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms