Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 TAF9P2-201ENST00000454958 515 ntBASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 RN7SL849P-201ENST00000485236 295 ntBASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 LINC00888-204ENST00000487386 421 ntBASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 AC109927.2-201ENST00000506416 303 ntBASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 AK6-204ENST00000512561 587 ntTSL 5 BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 C1GALT1P3-201ENST00000522049 819 ntBASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 AC090115.2-201ENST00000548060 883 ntBASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 ACTR3BP3-201ENST00000565577 979 ntBASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 AC023827.2-201ENST00000566880 1061 ntBASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 VN1R83P-201ENST00000595685 445 ntBASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 AL021997.1-201ENST00000605757 193 ntBASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 RN7SKP299-201ENST00000606679 301 ntBASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 AC006453.3-201ENST00000635891 377 ntBASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 AC007938.1-201ENST00000562524 2902 ntBASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 LCOR-201ENST00000286067 4542 ntBASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 AC107980.1-201ENST00000558671 3355 ntBASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 AL121949.2-201ENST00000403446 1548 ntBASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 AC104162.1-201ENST00000430831 2382 ntBASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 C1D-202ENST00000407324 1379 ntTSL 3 BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 AP000526.1-201ENST00000603308 1388 ntBASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 AC061975.7-201ENST00000592016 2692 ntBASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 RNU6-553P-201ENST00000364047 96 ntBASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 AL590762.1-201ENST00000391782 432 ntBASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 MRPL32P1-201ENST00000406301 247 ntBASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 ZNF37CP-201ENST00000406795 241 ntBASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 GSTA6P-201ENST00000424144 582 ntBASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 SNX19-202ENST00000426933 888 ntTSL 2 BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 ETF1P3-201ENST00000430422 1160 ntBASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 BX119917.1-201ENST00000432517 502 ntBASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 PHB2P1-201ENST00000434943 890 ntBASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 CCNJP1-201ENST00000450600 1149 ntBASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 OR13C1P-201ENST00000457612 963 ntBASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 AC079193.1-201ENST00000460497 588 ntBASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 AC104689.1-201ENST00000473356 768 ntBASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 AC131233.1-201ENST00000479200 955 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms