Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC9.49□□□□□ -0.89
TOPBP1Q92547 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
TOPBP1Q92547 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
TOPBP1Q92547 CSMD2-205ENST00000373381 13698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
TOPBP1Q92547 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC9.49□□□□□ -0.89
TOPBP1Q92547 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
TOPBP1Q92547 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC9.48□□□□□ -0.89
TOPBP1Q92547 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
TOPBP1Q92547 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC9.48□□□□□ -0.89
TOPBP1Q92547 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC9.48□□□□□ -0.89
TOPBP1Q92547 AC119674.1-213ENST00000641177 1386 ntBASIC9.48□□□□□ -0.89
TOPBP1Q92547 RNU1-43P-201ENST00000365052 165 ntBASIC9.48□□□□□ -0.89
TOPBP1Q92547 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TOPBP1Q92547 AL035419.1-201ENST00000397037 564 ntBASIC9.48□□□□□ -0.89
TOPBP1Q92547 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC9.48□□□□□ -0.89
TOPBP1Q92547 AC105399.1-202ENST00000447303 205 ntBASIC9.48□□□□□ -0.89
TOPBP1Q92547 AC092324.1-201ENST00000468671 324 ntBASIC9.48□□□□□ -0.89
TOPBP1Q92547 AC006463.2-201ENST00000473326 348 ntBASIC9.48□□□□□ -0.89
TOPBP1Q92547 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC9.48□□□□□ -0.89
TOPBP1Q92547 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC9.48□□□□□ -0.89
TOPBP1Q92547 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC9.48□□□□□ -0.89
TOPBP1Q92547 MIR2117-201ENST00000516780 80 ntBASIC9.48□□□□□ -0.89
TOPBP1Q92547 AC063949.1-201ENST00000552900 865 ntBASIC9.48□□□□□ -0.89
TOPBP1Q92547 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
TOPBP1Q92547 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC9.48□□□□□ -0.89
TOPBP1Q92547 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC9.48□□□□□ -0.89
TOPBP1Q92547 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC9.48□□□□□ -0.89
TOPBP1Q92547 CYP4F35P-202ENST00000636121 390 ntBASIC9.48□□□□□ -0.89
TOPBP1Q92547 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TOPBP1Q92547 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC9.48□□□□□ -0.89
TOPBP1Q92547 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TOPBP1Q92547 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TOPBP1Q92547 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
TOPBP1Q92547 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TOPBP1Q92547 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
TOPBP1Q92547 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC9.48□□□□□ -0.89
TOPBP1Q92547 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC9.48□□□□□ -0.89
TOPBP1Q92547 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TOPBP1Q92547 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
TOPBP1Q92547 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC9.47□□□□□ -0.89
TOPBP1Q92547 HNRNPA3P4-201ENST00000427514 803 ntBASIC9.47□□□□□ -0.89
TOPBP1Q92547 AC096775.1-201ENST00000437724 448 ntBASIC9.47□□□□□ -0.89
TOPBP1Q92547 CEACAMP9-201ENST00000442990 513 ntBASIC9.47□□□□□ -0.89
TOPBP1Q92547 AC079922.1-201ENST00000443291 359 ntBASIC9.47□□□□□ -0.89
TOPBP1Q92547 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC9.47□□□□□ -0.89
TOPBP1Q92547 RPS3AP53-201ENST00000454716 778 ntBASIC9.47□□□□□ -0.89
TOPBP1Q92547 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC9.47□□□□□ -0.89
TOPBP1Q92547 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC9.47□□□□□ -0.89
TOPBP1Q92547 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC9.47□□□□□ -0.89
TOPBP1Q92547 BRD9P1-201ENST00000529855 560 ntBASIC9.47□□□□□ -0.89
TOPBP1Q92547 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC9.47□□□□□ -0.89
TOPBP1Q92547 AC090607.5-201ENST00000615692 224 ntBASIC9.47□□□□□ -0.89
TOPBP1Q92547 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC9.47□□□□□ -0.89
TOPBP1Q92547 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC9.47□□□□□ -0.89
TOPBP1Q92547 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
TOPBP1Q92547 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
TOPBP1Q92547 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC9.47□□□□□ -0.89
TOPBP1Q92547 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TOPBP1Q92547 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
TOPBP1Q92547 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC9.47□□□□□ -0.89
TOPBP1Q92547 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
TOPBP1Q92547 GNAS-202ENST00000306090 477 ntTSL 5 BASIC9.46□□□□□ -0.89
TOPBP1Q92547 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC9.46□□□□□ -0.89
TOPBP1Q92547 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC9.46□□□□□ -0.89
TOPBP1Q92547 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC9.46□□□□□ -0.89
TOPBP1Q92547 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC9.46□□□□□ -0.89
TOPBP1Q92547 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC9.46□□□□□ -0.89
TOPBP1Q92547 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC9.46□□□□□ -0.89
TOPBP1Q92547 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC9.46□□□□□ -0.89
TOPBP1Q92547 AC073581.1-201ENST00000519036 575 ntBASIC9.46□□□□□ -0.89
TOPBP1Q92547 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC9.46□□□□□ -0.89
TOPBP1Q92547 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC9.46□□□□□ -0.89
TOPBP1Q92547 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC9.46□□□□□ -0.89
TOPBP1Q92547 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
TOPBP1Q92547 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
TOPBP1Q92547 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
TOPBP1Q92547 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
TOPBP1Q92547 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC9.46□□□□□ -0.89
TOPBP1Q92547 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC9.46□□□□□ -0.89
TOPBP1Q92547 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
TOPBP1Q92547 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
TOPBP1Q92547 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
TOPBP1Q92547 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
TOPBP1Q92547 PLEKHG4B-201ENST00000283426 11515 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
TOPBP1Q92547 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
TOPBP1Q92547 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC9.46□□□□□ -0.9
TOPBP1Q92547 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
TOPBP1Q92547 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.9
TOPBP1Q92547 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC9.46□□□□□ -0.9
TOPBP1Q92547 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC9.46□□□□□ -0.9
TOPBP1Q92547 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC9.46□□□□□ -0.9
TOPBP1Q92547 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
TOPBP1Q92547 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
TOPBP1Q92547 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
TOPBP1Q92547 AC091390.1-201ENST00000433904 331 ntBASIC9.46□□□□□ -0.9
TOPBP1Q92547 AC011753.3-201ENST00000443436 406 ntBASIC9.46□□□□□ -0.9
TOPBP1Q92547 AL035690.1-201ENST00000490892 383 ntBASIC9.46□□□□□ -0.9
TOPBP1Q92547 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC9.46□□□□□ -0.9
TOPBP1Q92547 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC9.46□□□□□ -0.9
TOPBP1Q92547 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC9.46□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms