Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 AL137141.1-201ENST00000624622 4836 ntBASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 RNA5SP211-201ENST00000365516 117 ntBASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 AL035422.1-201ENST00000414193 397 ntBASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 AC092865.3-201ENST00000425390 1026 ntBASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 AL663074.2-201ENST00000440621 479 ntBASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 AL356121.1-201ENST00000442911 156 ntBASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 PFN1P6-201ENST00000476786 399 ntBASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 AC106822.1-201ENST00000502647 526 ntBASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 AC007346.2-201ENST00000564816 892 ntBASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 AC007346.1-201ENST00000569208 867 ntBASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 MIR744-201ENST00000578242 98 ntBASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 AP001357.1-201ENST00000586304 1053 ntBASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 AC092681.3-201ENST00000609463 678 ntBASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 Z95327.3-201ENST00000610385 572 ntBASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 AC000095.2-202ENST00000637415 154 ntBASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 MTCO1P28-201ENST00000574177 1528 ntBASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLHC1Q8NHS4 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 AC130360.1-201ENST00000425489 1117 ntBASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 AC099677.3-201ENST00000427081 395 ntBASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 RPS12P17-201ENST00000438591 377 ntBASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 AC010240.2-201ENST00000445363 1205 ntBASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 RPS27P20-201ENST00000492051 246 ntBASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 AC008629.2-201ENST00000503783 483 ntBASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 MAST4-IT1-201ENST00000514241 658 ntBASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 AC020937.1-201ENST00000519677 1013 ntBASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 AC130365.2-201ENST00000525882 1201 ntBASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 MT1CP-201ENST00000567054 174 ntBASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 AL078601.3-201ENST00000573303 535 ntBASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 AL021918.2-201ENST00000613415 194 ntBASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 uc_338.29-201ENST00000615099 168 ntBASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLHC1Q8NHS4 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms