Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 OR5BK1P-201ENST00000550421 823 ntBASIC5.89□□□□□ -1.47
CPEB3Q8NE35 AC023310.2-201ENST00000553844 547 ntBASIC5.89□□□□□ -1.47
CPEB3Q8NE35 DUXAP6-201ENST00000553858 601 ntBASIC5.89□□□□□ -1.47
CPEB3Q8NE35 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 AC104229.1-201ENST00000561364 255 ntBASIC5.89□□□□□ -1.47
CPEB3Q8NE35 AC109446.2-201ENST00000567872 497 ntBASIC5.89□□□□□ -1.47
CPEB3Q8NE35 RN7SL199P-201ENST00000578752 281 ntBASIC5.89□□□□□ -1.47
CPEB3Q8NE35 RN7SL656P-201ENST00000579044 281 ntBASIC5.89□□□□□ -1.47
CPEB3Q8NE35 RN7SL404P-201ENST00000582421 281 ntBASIC5.89□□□□□ -1.47
CPEB3Q8NE35 AC005244.1-201ENST00000582566 339 ntBASIC5.89□□□□□ -1.47
CPEB3Q8NE35 AL353778.1-201ENST00000603149 408 ntBASIC5.89□□□□□ -1.47
CPEB3Q8NE35 MTCO3P22-201ENST00000603219 784 ntBASIC5.89□□□□□ -1.47
CPEB3Q8NE35 AC008121.2-201ENST00000614647 523 ntBASIC5.89□□□□□ -1.47
CPEB3Q8NE35 AC006328.2-201ENST00000623198 397 ntBASIC5.89□□□□□ -1.47
CPEB3Q8NE35 AC012005.2-201ENST00000624333 397 ntBASIC5.89□□□□□ -1.47
CPEB3Q8NE35 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 AC135068.11-201ENST00000636378 921 ntBASIC5.89□□□□□ -1.47
CPEB3Q8NE35 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.89□□□□□ -1.47
CPEB3Q8NE35 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC5.88□□□□□ -1.47
CPEB3Q8NE35 AC009220.2-201ENST00000489759 1751 ntBASIC5.88□□□□□ -1.47
CPEB3Q8NE35 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CPEB3Q8NE35 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CPEB3Q8NE35 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CPEB3Q8NE35 CTNNA1P1-201ENST00000515849 2728 ntBASIC5.88□□□□□ -1.47
CPEB3Q8NE35 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CPEB3Q8NE35 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CPEB3Q8NE35 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CPEB3Q8NE35 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.88□□□□□ -1.47
CPEB3Q8NE35 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC5.88□□□□□ -1.47
CPEB3Q8NE35 Y_RNA.169-201ENST00000363745 96 ntBASIC5.88□□□□□ -1.47
CPEB3Q8NE35 RNU1-24P-201ENST00000364285 165 ntBASIC5.88□□□□□ -1.47
CPEB3Q8NE35 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.88□□□□□ -1.47
CPEB3Q8NE35 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
CPEB3Q8NE35 RNU6-796P-201ENST00000391086 107 ntBASIC5.88□□□□□ -1.47
CPEB3Q8NE35 RN7SKP182-201ENST00000410772 298 ntBASIC5.88□□□□□ -1.47
CPEB3Q8NE35 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC5.88□□□□□ -1.47
CPEB3Q8NE35 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CPEB3Q8NE35 OR5M12P-201ENST00000423388 929 ntBASIC5.88□□□□□ -1.47
CPEB3Q8NE35 RPS10P21-201ENST00000430654 475 ntBASIC5.88□□□□□ -1.47
CPEB3Q8NE35 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.88□□□□□ -1.47
CPEB3Q8NE35 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CPEB3Q8NE35 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CPEB3Q8NE35 MTCYBP12-201ENST00000440559 1134 ntBASIC5.88□□□□□ -1.47
CPEB3Q8NE35 RPS19P6-201ENST00000441327 433 ntBASIC5.88□□□□□ -1.47
CPEB3Q8NE35 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.88□□□□□ -1.47
CPEB3Q8NE35 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.88□□□□□ -1.47
CPEB3Q8NE35 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.88□□□□□ -1.47
CPEB3Q8NE35 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.88□□□□□ -1.47
CPEB3Q8NE35 MTND2P28-201ENST00000457540 1044 ntBASIC5.88□□□□□ -1.47
CPEB3Q8NE35 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.88□□□□□ -1.47
CPEB3Q8NE35 AC022336.1-201ENST00000475510 337 ntBASIC5.88□□□□□ -1.47
CPEB3Q8NE35 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.88□□□□□ -1.47
CPEB3Q8NE35 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.88□□□□□ -1.47
CPEB3Q8NE35 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.88□□□□□ -1.47
CPEB3Q8NE35 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.88□□□□□ -1.47
CPEB3Q8NE35 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.88□□□□□ -1.47
CPEB3Q8NE35 SUMO2P7-201ENST00000511179 285 ntBASIC5.88□□□□□ -1.47
CPEB3Q8NE35 AC017007.1-201ENST00000511960 415 ntBASIC5.88□□□□□ -1.47
CPEB3Q8NE35 AC010442.1-201ENST00000515583 816 ntBASIC5.88□□□□□ -1.47
CPEB3Q8NE35 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.88□□□□□ -1.47
CPEB3Q8NE35 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC5.88□□□□□ -1.47
CPEB3Q8NE35 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.88□□□□□ -1.47
CPEB3Q8NE35 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC5.88□□□□□ -1.47
CPEB3Q8NE35 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.88□□□□□ -1.47
CPEB3Q8NE35 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.88□□□□□ -1.47
CPEB3Q8NE35 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC5.88□□□□□ -1.47
CPEB3Q8NE35 AC004232.1-201ENST00000571388 208 ntBASIC5.88□□□□□ -1.47
CPEB3Q8NE35 AC025283.1-201ENST00000572039 734 ntBASIC5.88□□□□□ -1.47
CPEB3Q8NE35 AP005136.1-201ENST00000579765 429 ntBASIC5.88□□□□□ -1.47
CPEB3Q8NE35 RN7SL32P-201ENST00000580514 281 ntBASIC5.88□□□□□ -1.47
CPEB3Q8NE35 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CPEB3Q8NE35 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC5.88□□□□□ -1.47
CPEB3Q8NE35 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC5.88□□□□□ -1.47
CPEB3Q8NE35 Z99497.2-201ENST00000603634 310 ntBASIC5.88□□□□□ -1.47
CPEB3Q8NE35 AL137000.1-201ENST00000610528 1244 ntBASIC5.88□□□□□ -1.47
CPEB3Q8NE35 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC5.88□□□□□ -1.47
CPEB3Q8NE35 AC010333.3-201ENST00000615100 402 ntBASIC5.88□□□□□ -1.47
CPEB3Q8NE35 AL354718.1-201ENST00000619764 589 ntBASIC5.88□□□□□ -1.47
CPEB3Q8NE35 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CPEB3Q8NE35 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CPEB3Q8NE35 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.88□□□□□ -1.47
CPEB3Q8NE35 AC008432.1-201ENST00000615912 1320 ntBASIC5.88□□□□□ -1.47
CPEB3Q8NE35 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CPEB3Q8NE35 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms