Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.51□□□□□ -1.53
LINC00346Q8IVM7 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LINC00346Q8IVM7 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.51□□□□□ -1.53
LINC00346Q8IVM7 AC092692.1-201ENST00000623625 2595 ntBASIC5.51□□□□□ -1.53
LINC00346Q8IVM7 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.51□□□□□ -1.53
LINC00346Q8IVM7 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 AL355377.1-201ENST00000621125 1653 ntBASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 AP000432.2-201ENST00000624164 2048 ntBASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 SNORD115-48-201ENST00000364764 76 ntBASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 RNA5SP485-201ENST00000365053 119 ntBASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 MT-TP-201ENST00000387461 68 ntBASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 DHFRP2-201ENST00000414224 547 ntBASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 AC092601.1-201ENST00000444526 383 ntBASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 AC112187.1-201ENST00000455837 479 ntBASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 OR9N1P-202ENST00000494289 481 ntBASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 AC021087.2-201ENST00000504656 1203 ntBASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 RN7SKP248-201ENST00000516278 305 ntBASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 IGHV4-55-201ENST00000520889 368 ntBASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 MTND2P7-201ENST00000521337 640 ntBASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 AC135983.3-201ENST00000528049 1226 ntBASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 OR8X1P-201ENST00000534542 869 ntBASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 AC008055.1-201ENST00000547032 609 ntBASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 NPIPB1P-202ENST00000588786 828 ntBASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 AC068020.1-201ENST00000594215 661 ntBASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 AL589765.6-201ENST00000601909 549 ntBASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 AC130352.1-201ENST00000602979 661 ntBASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 AC074140.1-201ENST00000621617 208 ntBASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 AC068769.1-201ENST00000474767 2426 ntBASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 GTF2IP4-201ENST00000453092 2054 ntBASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 AL606537.1-201ENST00000607258 2011 ntBASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.5□□□□□ -1.53
LINC00346Q8IVM7 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LINC00346Q8IVM7 CCNT2P1-201ENST00000423082 1315 ntBASIC5.49□□□□□ -1.53
LINC00346Q8IVM7 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LINC00346Q8IVM7 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LINC00346Q8IVM7 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.49□□□□□ -1.53
LINC00346Q8IVM7 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LINC00346Q8IVM7 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.49□□□□□ -1.53
LINC00346Q8IVM7 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LINC00346Q8IVM7 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LINC00346Q8IVM7 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
LINC00346Q8IVM7 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LINC00346Q8IVM7 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.49□□□□□ -1.53
LINC00346Q8IVM7 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
LINC00346Q8IVM7 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LINC00346Q8IVM7 UBE2V1P15-201ENST00000407776 448 ntBASIC5.49□□□□□ -1.53
LINC00346Q8IVM7 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.49□□□□□ -1.53
LINC00346Q8IVM7 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.49□□□□□ -1.53
LINC00346Q8IVM7 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms