Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 LYPLA1P3-201ENST00000402650 695 ntBASIC5.65□□□□□ -1.5
CCDC71Q8IV32 HMGN1P20-201ENST00000411849 300 ntBASIC5.65□□□□□ -1.5
CCDC71Q8IV32 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC71Q8IV32 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
CCDC71Q8IV32 AC117434.1-201ENST00000419971 836 ntBASIC5.65□□□□□ -1.5
CCDC71Q8IV32 RPS3P2-201ENST00000421346 701 ntBASIC5.65□□□□□ -1.5
CCDC71Q8IV32 AC066692.1-201ENST00000421721 457 ntBASIC5.65□□□□□ -1.5
CCDC71Q8IV32 REREP1Y-201ENST00000422655 198 ntBASIC5.65□□□□□ -1.5
CCDC71Q8IV32 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC71Q8IV32 AC073410.1-201ENST00000435125 589 ntBASIC5.65□□□□□ -1.5
CCDC71Q8IV32 KRT8P51-201ENST00000438938 274 ntBASIC5.65□□□□□ -1.5
CCDC71Q8IV32 REREP2Y-201ENST00000439103 200 ntBASIC5.65□□□□□ -1.5
CCDC71Q8IV32 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC71Q8IV32 SETP20-201ENST00000457046 852 ntBASIC5.65□□□□□ -1.5
CCDC71Q8IV32 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC71Q8IV32 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC71Q8IV32 AC098847.1-201ENST00000473094 348 ntBASIC5.65□□□□□ -1.5
CCDC71Q8IV32 RN7SL369P-201ENST00000477138 299 ntBASIC5.65□□□□□ -1.5
CCDC71Q8IV32 RPL12P31-201ENST00000478433 450 ntBASIC5.65□□□□□ -1.5
CCDC71Q8IV32 AC012123.2-201ENST00000485809 248 ntBASIC5.65□□□□□ -1.5
CCDC71Q8IV32 RN7SL284P-201ENST00000498823 275 ntBASIC5.65□□□□□ -1.5
CCDC71Q8IV32 ST13P12-201ENST00000508958 1094 ntBASIC5.65□□□□□ -1.5
CCDC71Q8IV32 TOMM22P4-201ENST00000511318 336 ntBASIC5.65□□□□□ -1.5
CCDC71Q8IV32 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC71Q8IV32 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC71Q8IV32 IGKV3D-25-201ENST00000519599 235 ntBASIC5.65□□□□□ -1.5
CCDC71Q8IV32 TRIM77BP-201ENST00000524985 1119 ntBASIC5.65□□□□□ -1.5
CCDC71Q8IV32 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC71Q8IV32 NANOGNBP2-201ENST00000544753 553 ntBASIC5.65□□□□□ -1.5
CCDC71Q8IV32 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC71Q8IV32 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC71Q8IV32 AL049779.3-201ENST00000557141 606 ntBASIC5.65□□□□□ -1.5
CCDC71Q8IV32 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC71Q8IV32 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC71Q8IV32 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC71Q8IV32 AC008521.2-201ENST00000591021 259 ntBASIC5.65□□□□□ -1.5
CCDC71Q8IV32 AL161912.3-201ENST00000605404 628 ntBASIC5.65□□□□□ -1.5
CCDC71Q8IV32 AC073389.3-201ENST00000609434 935 ntBASIC5.65□□□□□ -1.5
CCDC71Q8IV32 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC71Q8IV32 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC71Q8IV32 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC71Q8IV32 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC71Q8IV32 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC71Q8IV32 OR7A1P-202ENST00000641542 1158 ntBASIC5.65□□□□□ -1.5
CCDC71Q8IV32 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
CCDC71Q8IV32 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.65□□□□□ -1.51
CCDC71Q8IV32 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.65□□□□□ -1.51
CCDC71Q8IV32 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
CCDC71Q8IV32 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
CCDC71Q8IV32 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC71Q8IV32 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
CCDC71Q8IV32 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.65□□□□□ -1.51
CCDC71Q8IV32 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC71Q8IV32 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.65□□□□□ -1.51
CCDC71Q8IV32 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC71Q8IV32 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC71Q8IV32 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC71Q8IV32 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC71Q8IV32 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC71Q8IV32 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC71Q8IV32 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC71Q8IV32 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC71Q8IV32 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CCDC71Q8IV32 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC71Q8IV32 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC71Q8IV32 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC71Q8IV32 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CCDC71Q8IV32 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC71Q8IV32 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC71Q8IV32 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CCDC71Q8IV32 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC71Q8IV32 SNORD1C-201ENST00000363315 78 ntBASIC5.64□□□□□ -1.51
CCDC71Q8IV32 U3.10-201ENST00000364459 214 ntBASIC5.64□□□□□ -1.51
CCDC71Q8IV32 RNA5SP510-201ENST00000364697 99 ntBASIC5.64□□□□□ -1.51
CCDC71Q8IV32 MIR130B-202ENST00000385018 82 ntBASIC5.64□□□□□ -1.51
CCDC71Q8IV32 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC71Q8IV32 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC71Q8IV32 SOCS5P1-201ENST00000440415 949 ntBASIC5.64□□□□□ -1.51
CCDC71Q8IV32 ATP5LP2-201ENST00000440646 311 ntBASIC5.64□□□□□ -1.51
CCDC71Q8IV32 AC016908.1-201ENST00000442571 1219 ntBASIC5.64□□□□□ -1.51
CCDC71Q8IV32 AL590004.3-202ENST00000445883 451 ntBASIC5.64□□□□□ -1.51
CCDC71Q8IV32 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC71Q8IV32 PPIAP7-201ENST00000454070 489 ntBASIC5.64□□□□□ -1.51
CCDC71Q8IV32 HLA-DPA3-207ENST00000454398 229 ntBASIC5.64□□□□□ -1.51
CCDC71Q8IV32 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC71Q8IV32 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC71Q8IV32 AC084754.1-201ENST00000463466 464 ntBASIC5.64□□□□□ -1.51
CCDC71Q8IV32 AC023194.2-201ENST00000465398 406 ntBASIC5.64□□□□□ -1.51
CCDC71Q8IV32 RN7SL643P-201ENST00000471845 291 ntBASIC5.64□□□□□ -1.51
CCDC71Q8IV32 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.64□□□□□ -1.51
CCDC71Q8IV32 AC093719.1-201ENST00000480427 441 ntBASIC5.64□□□□□ -1.51
CCDC71Q8IV32 RPL7P51-201ENST00000490532 749 ntBASIC5.64□□□□□ -1.51
CCDC71Q8IV32 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC71Q8IV32 AC136777.2-201ENST00000522979 358 ntBASIC5.64□□□□□ -1.51
CCDC71Q8IV32 NATP-201ENST00000523491 878 ntBASIC5.64□□□□□ -1.51
CCDC71Q8IV32 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC71Q8IV32 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC71Q8IV32 AP000620.1-201ENST00000527147 504 ntBASIC5.64□□□□□ -1.51
CCDC71Q8IV32 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC71Q8IV32 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms