Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 RBMY2AP-201ENST00000445405 1157 ntBASIC5.55□□□□□ -1.52
TMEM53Q6P2H8 RBMY2CP-201ENST00000448575 1157 ntBASIC5.55□□□□□ -1.52
TMEM53Q6P2H8 RBMY2DP-202ENST00000448881 1157 ntBASIC5.55□□□□□ -1.52
TMEM53Q6P2H8 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.55□□□□□ -1.52
TMEM53Q6P2H8 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.55□□□□□ -1.52
TMEM53Q6P2H8 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.55□□□□□ -1.52
TMEM53Q6P2H8 RPL5P22-201ENST00000480199 884 ntBASIC5.55□□□□□ -1.52
TMEM53Q6P2H8 GM2AP2-201ENST00000491764 562 ntBASIC5.55□□□□□ -1.52
TMEM53Q6P2H8 RPSAP51-201ENST00000497462 645 ntBASIC5.55□□□□□ -1.52
TMEM53Q6P2H8 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
TMEM53Q6P2H8 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.55□□□□□ -1.52
TMEM53Q6P2H8 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TMEM53Q6P2H8 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
TMEM53Q6P2H8 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC5.55□□□□□ -1.52
TMEM53Q6P2H8 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.55□□□□□ -1.52
TMEM53Q6P2H8 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.55□□□□□ -1.52
TMEM53Q6P2H8 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TMEM53Q6P2H8 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.55□□□□□ -1.52
TMEM53Q6P2H8 AL589765.6-201ENST00000601909 549 ntBASIC5.55□□□□□ -1.52
TMEM53Q6P2H8 AC012368.3-201ENST00000604190 219 ntBASIC5.55□□□□□ -1.52
TMEM53Q6P2H8 NDUFB9P1-201ENST00000604683 510 ntBASIC5.55□□□□□ -1.52
TMEM53Q6P2H8 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.55□□□□□ -1.52
TMEM53Q6P2H8 AC024255.1-201ENST00000614376 102 ntBASIC5.55□□□□□ -1.52
TMEM53Q6P2H8 MIR6813-201ENST00000621638 56 ntBASIC5.55□□□□□ -1.52
TMEM53Q6P2H8 AL122023.1-201ENST00000622847 530 ntBASIC5.55□□□□□ -1.52
TMEM53Q6P2H8 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.55□□□□□ -1.52
TMEM53Q6P2H8 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TMEM53Q6P2H8 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TMEM53Q6P2H8 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
TMEM53Q6P2H8 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TMEM53Q6P2H8 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TMEM53Q6P2H8 THAP12P5-201ENST00000405864 2275 ntBASIC5.55□□□□□ -1.52
TMEM53Q6P2H8 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.55□□□□□ -1.52
TMEM53Q6P2H8 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.55□□□□□ -1.52
TMEM53Q6P2H8 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
TMEM53Q6P2H8 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TMEM53Q6P2H8 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 AC092376.2-201ENST00000622621 4116 ntBASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 AC119674.1-202ENST00000641333 1860 ntBASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 AC003045.1-201ENST00000398779 713 ntBASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 RN7SKP146-201ENST00000410242 334 ntBASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 AC002127.1-201ENST00000421305 225 ntBASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 OSTCP4-201ENST00000424397 449 ntBASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 USP24P1-201ENST00000433802 779 ntBASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 AC079922.1-201ENST00000443291 359 ntBASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 OR2L9P-201ENST00000444456 913 ntBASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 RN7SL369P-201ENST00000477138 299 ntBASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 AC044810.1-201ENST00000480271 711 ntBASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 SNORA74.1-201ENST00000516320 180 ntBASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 RNA5SP400-201ENST00000517155 111 ntBASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 OR10D4P-201ENST00000525892 951 ntBASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 AC099654.15-201ENST00000639802 509 ntBASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 OR7E91P-202ENST00000642062 1198 ntBASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TMEM53Q6P2H8 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TMEM53Q6P2H8 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TMEM53Q6P2H8 AC021242.1-201ENST00000507315 2035 ntBASIC5.53□□□□□ -1.52
TMEM53Q6P2H8 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
TMEM53Q6P2H8 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.53□□□□□ -1.52
TMEM53Q6P2H8 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
TMEM53Q6P2H8 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TMEM53Q6P2H8 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
TMEM53Q6P2H8 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TMEM53Q6P2H8 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
TMEM53Q6P2H8 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.53□□□□□ -1.52
TMEM53Q6P2H8 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.53□□□□□ -1.52
TMEM53Q6P2H8 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
TMEM53Q6P2H8 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
TMEM53Q6P2H8 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TMEM53Q6P2H8 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms