Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 RNU4-34P-201ENST00000410431 124 ntBASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 AC007394.1-201ENST00000421941 531 ntBASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 TNPO1P1-201ENST00000423641 1138 ntBASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 AL445928.1-201ENST00000435545 222 ntBASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 AC104164.1-201ENST00000460282 590 ntBASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 AC073594.1-201ENST00000462065 364 ntBASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 AC022215.1-201ENST00000481770 362 ntBASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 RPL32P9-201ENST00000487963 407 ntBASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 SNORA43.3-201ENST00000517240 103 ntBASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 AC008676.3-201ENST00000521237 435 ntBASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 AC044860.2-201ENST00000561005 179 ntBASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 AC005229.3-201ENST00000603438 323 ntBASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 NF1P10-201ENST00000613227 742 ntBASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 AC004808.2-201ENST00000627965 773 ntBASIC5.9□□□□□ -1.46
LYSMD4Q5XG99 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
LYSMD4Q5XG99 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
LYSMD4Q5XG99 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
LYSMD4Q5XG99 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
LYSMD4Q5XG99 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
LYSMD4Q5XG99 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
LYSMD4Q5XG99 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.9□□□□□ -1.47
LYSMD4Q5XG99 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC5.9□□□□□ -1.47
LYSMD4Q5XG99 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
LYSMD4Q5XG99 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
LYSMD4Q5XG99 AC120036.2-201ENST00000509729 1474 ntBASIC5.9□□□□□ -1.47
LYSMD4Q5XG99 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
LYSMD4Q5XG99 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC5.9□□□□□ -1.47
LYSMD4Q5XG99 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 AC011815.2-201ENST00000618230 2021 ntBASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 RN7SKP124-201ENST00000364730 341 ntBASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 RNU6-316P-201ENST00000391027 107 ntBASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 SPTLC1P2-201ENST00000407089 121 ntBASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 RN7SKP59-201ENST00000410520 314 ntBASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 RPS7P3-201ENST00000443360 580 ntBASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 RNU7-157P-201ENST00000459600 66 ntBASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 PFN1P6-201ENST00000476786 399 ntBASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 OR7E157P-201ENST00000494376 911 ntBASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 MIR3189-201ENST00000578735 73 ntBASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 AC010615.3-201ENST00000597319 394 ntBASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 AC004948.1-201ENST00000609858 672 ntBASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 AL139099.4-201ENST00000614802 114 ntBASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 AL445649.1-201ENST00000615941 691 ntBASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 AL591848.4-201ENST00000567832 3472 ntBASIC5.89□□□□□ -1.47
LYSMD4Q5XG99 NCOA4P3-201ENST00000513203 1877 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms