Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC9.36□□□□□ -0.91
SNAPC4Q5SXM2 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SNAPC4Q5SXM2 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC9.36□□□□□ -0.91
SNAPC4Q5SXM2 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
SNAPC4Q5SXM2 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SNAPC4Q5SXM2 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
SNAPC4Q5SXM2 AOX3P-204ENST00000491025 2107 ntBASIC9.36□□□□□ -0.91
SNAPC4Q5SXM2 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
SNAPC4Q5SXM2 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
SNAPC4Q5SXM2 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC9.35□□□□□ -0.91
SNAPC4Q5SXM2 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SNAPC4Q5SXM2 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC9.35□□□□□ -0.91
SNAPC4Q5SXM2 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC9.35□□□□□ -0.91
SNAPC4Q5SXM2 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SNAPC4Q5SXM2 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC9.35□□□□□ -0.91
SNAPC4Q5SXM2 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
SNAPC4Q5SXM2 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC9.35□□□□□ -0.91
SNAPC4Q5SXM2 AC104837.2-201ENST00000427236 424 ntBASIC9.35□□□□□ -0.91
SNAPC4Q5SXM2 RPL23AP40-201ENST00000487630 390 ntBASIC9.35□□□□□ -0.91
SNAPC4Q5SXM2 SNRPCP2-201ENST00000504370 475 ntBASIC9.35□□□□□ -0.91
SNAPC4Q5SXM2 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC9.35□□□□□ -0.91
SNAPC4Q5SXM2 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC9.35□□□□□ -0.91
SNAPC4Q5SXM2 AL512310.9-201ENST00000553311 948 ntBASIC9.35□□□□□ -0.91
SNAPC4Q5SXM2 RPL10P14-201ENST00000565265 298 ntBASIC9.35□□□□□ -0.91
SNAPC4Q5SXM2 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC9.35□□□□□ -0.91
SNAPC4Q5SXM2 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC9.35□□□□□ -0.91
SNAPC4Q5SXM2 AC090527.3-201ENST00000619041 548 ntBASIC9.35□□□□□ -0.91
SNAPC4Q5SXM2 WWOX-217ENST00000620008 450 ntTSL 2 BASIC9.35□□□□□ -0.91
SNAPC4Q5SXM2 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SNAPC4Q5SXM2 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
SNAPC4Q5SXM2 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC9.35□□□□□ -0.91
SNAPC4Q5SXM2 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC9.35□□□□□ -0.91
SNAPC4Q5SXM2 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
SNAPC4Q5SXM2 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
SNAPC4Q5SXM2 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
SNAPC4Q5SXM2 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
SNAPC4Q5SXM2 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
SNAPC4Q5SXM2 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SNAPC4Q5SXM2 AC112243.1-201ENST00000623949 3851 ntBASIC9.35□□□□□ -0.91
SNAPC4Q5SXM2 ZNF733P-202ENST00000444809 1573 ntBASIC9.35□□□□□ -0.91
SNAPC4Q5SXM2 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SNAPC4Q5SXM2 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC9.35□□□□□ -0.91
SNAPC4Q5SXM2 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC9.35□□□□□ -0.91
SNAPC4Q5SXM2 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC9.35□□□□□ -0.91
SNAPC4Q5SXM2 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
SNAPC4Q5SXM2 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC9.35□□□□□ -0.91
SNAPC4Q5SXM2 AC011493.1-201ENST00000596753 1632 ntBASIC9.35□□□□□ -0.91
SNAPC4Q5SXM2 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC9.35□□□□□ -0.91
SNAPC4Q5SXM2 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC9.35□□□□□ -0.91
SNAPC4Q5SXM2 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 RNU4-4P-201ENST00000364588 130 ntBASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 AL035419.1-201ENST00000397037 564 ntBASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 NMNAT1P5-201ENST00000559657 841 ntBASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 RPS6P23-201ENST00000413224 722 ntBASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 AC011742.2-201ENST00000443818 352 ntBASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 RN7SL738P-201ENST00000470264 297 ntBASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC9.34□□□□□ -0.91
SNAPC4Q5SXM2 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC9.34□□□□□ -0.92
SNAPC4Q5SXM2 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC9.33□□□□□ -0.92
SNAPC4Q5SXM2 MFSD8-219ENST00000641228 2559 ntBASIC9.33□□□□□ -0.92
SNAPC4Q5SXM2 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC9.33□□□□□ -0.92
SNAPC4Q5SXM2 AC092821.2-201ENST00000545710 2042 ntBASIC9.33□□□□□ -0.92
SNAPC4Q5SXM2 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SNAPC4Q5SXM2 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SNAPC4Q5SXM2 IARS-213ENST00000627121 4587 ntTSL 5 BASIC9.33□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms