Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 CCNT2P1-201ENST00000423082 1315 ntBASIC6.91□□□□□ -1.3
SHROOM1Q2M3G4 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SHROOM1Q2M3G4 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
SHROOM1Q2M3G4 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
SHROOM1Q2M3G4 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
SHROOM1Q2M3G4 AL353763.1-201ENST00000624467 1628 ntBASIC6.9□□□□□ -1.3
SHROOM1Q2M3G4 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SHROOM1Q2M3G4 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
SHROOM1Q2M3G4 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SHROOM1Q2M3G4 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.9□□□□□ -1.3
SHROOM1Q2M3G4 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SHROOM1Q2M3G4 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.9□□□□□ -1.3
SHROOM1Q2M3G4 SRRM1P3-201ENST00000426911 2678 ntBASIC6.9□□□□□ -1.3
SHROOM1Q2M3G4 WBP11P1-201ENST00000562560 1931 ntBASIC6.9□□□□□ -1.3
SHROOM1Q2M3G4 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
SHROOM1Q2M3G4 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.9□□□□□ -1.3
SHROOM1Q2M3G4 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.9□□□□□ -1.3
SHROOM1Q2M3G4 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
SHROOM1Q2M3G4 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.9□□□□□ -1.3
SHROOM1Q2M3G4 AC099677.3-201ENST00000427081 395 ntBASIC6.9□□□□□ -1.3
SHROOM1Q2M3G4 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SHROOM1Q2M3G4 OR13K1P-201ENST00000444577 975 ntBASIC6.9□□□□□ -1.3
SHROOM1Q2M3G4 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.9□□□□□ -1.3
SHROOM1Q2M3G4 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
SHROOM1Q2M3G4 RPL38P3-201ENST00000484463 213 ntBASIC6.9□□□□□ -1.3
SHROOM1Q2M3G4 CCDC11P1-201ENST00000503137 1162 ntBASIC6.9□□□□□ -1.3
SHROOM1Q2M3G4 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.9□□□□□ -1.3
SHROOM1Q2M3G4 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.9□□□□□ -1.3
SHROOM1Q2M3G4 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.9□□□□□ -1.3
SHROOM1Q2M3G4 MIR4505-201ENST00000582238 73 ntBASIC6.9□□□□□ -1.3
SHROOM1Q2M3G4 FO393422.1-201ENST00000603908 708 ntBASIC6.9□□□□□ -1.3
SHROOM1Q2M3G4 BX323046.1-201ENST00000610145 535 ntBASIC6.9□□□□□ -1.3
SHROOM1Q2M3G4 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
SHROOM1Q2M3G4 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SHROOM1Q2M3G4 AC011504.1-201ENST00000623331 4103 ntBASIC6.9□□□□□ -1.31
SHROOM1Q2M3G4 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.9□□□□□ -1.31
SHROOM1Q2M3G4 MFSD8-219ENST00000641228 2559 ntBASIC6.89□□□□□ -1.31
SHROOM1Q2M3G4 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.89□□□□□ -1.31
SHROOM1Q2M3G4 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
SHROOM1Q2M3G4 AC140479.2-201ENST00000421567 3130 ntBASIC6.89□□□□□ -1.31
SHROOM1Q2M3G4 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SHROOM1Q2M3G4 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
SHROOM1Q2M3G4 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
SHROOM1Q2M3G4 RNA5SP46-201ENST00000362370 120 ntBASIC6.89□□□□□ -1.31
SHROOM1Q2M3G4 RNA5SP132-201ENST00000364725 118 ntBASIC6.89□□□□□ -1.31
SHROOM1Q2M3G4 AL357752.1-201ENST00000412817 349 ntBASIC6.89□□□□□ -1.31
SHROOM1Q2M3G4 OR6E1P-201ENST00000414424 923 ntBASIC6.89□□□□□ -1.31
SHROOM1Q2M3G4 SDHDP6-201ENST00000414693 480 ntBASIC6.89□□□□□ -1.31
SHROOM1Q2M3G4 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.89□□□□□ -1.31
SHROOM1Q2M3G4 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.89□□□□□ -1.31
SHROOM1Q2M3G4 AC012075.1-201ENST00000436549 580 ntBASIC6.89□□□□□ -1.31
SHROOM1Q2M3G4 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SHROOM1Q2M3G4 AL451063.1-201ENST00000450164 1133 ntBASIC6.89□□□□□ -1.31
SHROOM1Q2M3G4 RN7SL515P-201ENST00000463999 297 ntBASIC6.89□□□□□ -1.31
SHROOM1Q2M3G4 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.89□□□□□ -1.31
SHROOM1Q2M3G4 RN7SL466P-201ENST00000497546 295 ntBASIC6.89□□□□□ -1.31
SHROOM1Q2M3G4 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.89□□□□□ -1.31
SHROOM1Q2M3G4 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SHROOM1Q2M3G4 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.89□□□□□ -1.31
SHROOM1Q2M3G4 AP001496.3-201ENST00000580230 913 ntBASIC6.89□□□□□ -1.31
SHROOM1Q2M3G4 AC091193.1-201ENST00000604640 448 ntBASIC6.89□□□□□ -1.31
SHROOM1Q2M3G4 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SHROOM1Q2M3G4 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
SHROOM1Q2M3G4 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
SHROOM1Q2M3G4 AC120036.2-201ENST00000509729 1474 ntBASIC6.89□□□□□ -1.31
SHROOM1Q2M3G4 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SHROOM1Q2M3G4 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.89□□□□□ -1.31
SHROOM1Q2M3G4 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SHROOM1Q2M3G4 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SHROOM1Q2M3G4 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.89□□□□□ -1.31
SHROOM1Q2M3G4 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
SHROOM1Q2M3G4 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SHROOM1Q2M3G4 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SHROOM1Q2M3G4 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SHROOM1Q2M3G4 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.88□□□□□ -1.31
SHROOM1Q2M3G4 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
SHROOM1Q2M3G4 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.88□□□□□ -1.31
SHROOM1Q2M3G4 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
SHROOM1Q2M3G4 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SHROOM1Q2M3G4 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.88□□□□□ -1.31
SHROOM1Q2M3G4 ICE2P1-201ENST00000512800 1849 ntBASIC6.88□□□□□ -1.31
SHROOM1Q2M3G4 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.88□□□□□ -1.31
SHROOM1Q2M3G4 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.88□□□□□ -1.31
SHROOM1Q2M3G4 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SHROOM1Q2M3G4 RN7SKP160-201ENST00000363804 340 ntBASIC6.88□□□□□ -1.31
SHROOM1Q2M3G4 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
SHROOM1Q2M3G4 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.88□□□□□ -1.31
SHROOM1Q2M3G4 RPL34P3-201ENST00000421454 338 ntBASIC6.88□□□□□ -1.31
SHROOM1Q2M3G4 FMO7P-201ENST00000436045 768 ntBASIC6.88□□□□□ -1.31
SHROOM1Q2M3G4 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.88□□□□□ -1.31
SHROOM1Q2M3G4 AL390119.1-201ENST00000440329 312 ntBASIC6.88□□□□□ -1.31
SHROOM1Q2M3G4 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.88□□□□□ -1.31
SHROOM1Q2M3G4 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.88□□□□□ -1.31
SHROOM1Q2M3G4 RPL32P33-201ENST00000487023 394 ntBASIC6.88□□□□□ -1.31
SHROOM1Q2M3G4 AC009120.1-201ENST00000493458 473 ntBASIC6.88□□□□□ -1.31
SHROOM1Q2M3G4 AC139365.2-201ENST00000517972 253 ntBASIC6.88□□□□□ -1.31
SHROOM1Q2M3G4 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
SHROOM1Q2M3G4 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.88□□□□□ -1.31
SHROOM1Q2M3G4 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC6.88□□□□□ -1.31
SHROOM1Q2M3G4 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms