Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC7.16□□□□□ -1.26
RSPO4Q2I0M5 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
RSPO4Q2I0M5 AC005034.4-201ENST00000603612 899 ntBASIC7.16□□□□□ -1.26
RSPO4Q2I0M5 AC096553.1-201ENST00000605169 829 ntBASIC7.16□□□□□ -1.26
RSPO4Q2I0M5 AP000860.1-201ENST00000605250 559 ntBASIC7.16□□□□□ -1.26
RSPO4Q2I0M5 AP005329.3-201ENST00000609924 686 ntBASIC7.16□□□□□ -1.26
RSPO4Q2I0M5 AC068726.1-201ENST00000610993 341 ntBASIC7.16□□□□□ -1.26
RSPO4Q2I0M5 Metazoa_SRP.108-201ENST00000621610 300 ntBASIC7.16□□□□□ -1.26
RSPO4Q2I0M5 AC016542.3-201ENST00000623520 619 ntBASIC7.16□□□□□ -1.26
RSPO4Q2I0M5 AL359220.1-202ENST00000500036 4499 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RSPO4Q2I0M5 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RSPO4Q2I0M5 AL365475.1-201ENST00000565135 1949 ntBASIC7.16□□□□□ -1.26
RSPO4Q2I0M5 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC7.16□□□□□ -1.26
RSPO4Q2I0M5 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
RSPO4Q2I0M5 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC7.16□□□□□ -1.26
RSPO4Q2I0M5 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RSPO4Q2I0M5 Z99496.1-201ENST00000469424 1477 ntBASIC7.16□□□□□ -1.26
RSPO4Q2I0M5 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
RSPO4Q2I0M5 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
RSPO4Q2I0M5 LINC01721-201ENST00000457274 2376 ntTSL 2 BASIC7.16□□□□□ -1.26
RSPO4Q2I0M5 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
RSPO4Q2I0M5 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC7.16□□□□□ -1.26
RSPO4Q2I0M5 LINC00663-203ENST00000586885 2546 ntBASIC7.16□□□□□ -1.26
RSPO4Q2I0M5 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
RSPO4Q2I0M5 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RSPO4Q2I0M5 ZNF611-203ENST00000540744 4417 ntAPPRIS P1 TSL 4 BASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 USP14-201ENST00000261601 4921 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 FCGR3B-209ENST00000614870 1993 ntTSL 5 BASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 KIDINS220-202ENST00000319688 3765 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 Y_RNA.144-201ENST00000363521 113 ntBASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 AC026310.1-201ENST00000396004 378 ntBASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 RN7SKP285-201ENST00000410137 318 ntBASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 RNU4-74P-201ENST00000411280 161 ntBASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 AL445183.3-201ENST00000414168 502 ntBASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 RPS7P12-201ENST00000422385 582 ntBASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 HNRNPA1P29-201ENST00000426409 879 ntBASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 HIGD1AP12-201ENST00000427832 281 ntBASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 AC128677.1-201ENST00000436016 442 ntBASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 SEPHS1P4-201ENST00000446112 1176 ntBASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 AL161937.1-202ENST00000451960 341 ntTSL 3 BASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 AC096576.1-201ENST00000489014 359 ntBASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 COX6B1P2-201ENST00000489624 230 ntBASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 IGBP1P4-201ENST00000503202 879 ntBASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 AC017037.1-201ENST00000508460 471 ntBASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 CASC11-203ENST00000519071 791 ntTSL 3 BASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 HIGD1AP18-201ENST00000520730 278 ntBASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 OR6M3P-201ENST00000531567 700 ntBASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 AL355836.1-201ENST00000555951 870 ntBASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 AC022558.2-201ENST00000566841 754 ntTSL 5 BASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 RN7SL230P-201ENST00000580835 303 ntBASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 AC010323.2-201ENST00000596405 594 ntBASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 MIMT1-201ENST00000597105 1050 ntBASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 AC006539.2-201ENST00000601729 572 ntBASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 AC015849.2-201ENST00000605738 409 ntBASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 AL589743.7-201ENST00000612637 233 ntBASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 AL158196.1-201ENST00000616786 434 ntBASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 AC008626.2-201ENST00000624425 248 ntBASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 AC068213.1-201ENST00000625124 226 ntBASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 AL357140.4-201ENST00000636827 412 ntBASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 TCF4-203ENST00000398339 2551 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC7.15□□□□□ -1.26
RSPO4Q2I0M5 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC7.15□□□□□ -1.27
RSPO4Q2I0M5 AC092111.2-201ENST00000611627 1414 ntBASIC7.15□□□□□ -1.27
RSPO4Q2I0M5 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
RSPO4Q2I0M5 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC7.15□□□□□ -1.27
RSPO4Q2I0M5 SLC8A1-201ENST00000332839 2922 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
RSPO4Q2I0M5 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC7.15□□□□□ -1.27
RSPO4Q2I0M5 C4orf46-202ENST00000508457 3358 ntTSL 5 BASIC7.15□□□□□ -1.27
RSPO4Q2I0M5 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.27
RSPO4Q2I0M5 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC7.15□□□□□ -1.27
RSPO4Q2I0M5 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
RSPO4Q2I0M5 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.27
RSPO4Q2I0M5 ARHGAP42P2-201ENST00000416089 2140 ntBASIC7.15□□□□□ -1.27
RSPO4Q2I0M5 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
RSPO4Q2I0M5 AC008498.2-201ENST00000624033 2322 ntBASIC7.15□□□□□ -1.27
RSPO4Q2I0M5 IL31RA-205ENST00000396836 2426 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
RSPO4Q2I0M5 AC104083.1-201ENST00000569449 2615 ntBASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 RABGEF1-203ENST00000439720 3065 ntTSL 2 BASIC7.14□□□□□ -1.27
RSPO4Q2I0M5 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms