Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AL136038.1-201ENST00000497246 351 ntBASIC6.87□□□□□ -1.31
GABPAQ06546 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.87□□□□□ -1.31
GABPAQ06546 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.87□□□□□ -1.31
GABPAQ06546 RNA5SP362-201ENST00000516048 118 ntBASIC6.87□□□□□ -1.31
GABPAQ06546 RNU6-615P-201ENST00000516065 106 ntBASIC6.87□□□□□ -1.31
GABPAQ06546 SCARNA6.1-201ENST00000516989 238 ntBASIC6.87□□□□□ -1.31
GABPAQ06546 SNORA43.3-201ENST00000517240 103 ntBASIC6.87□□□□□ -1.31
GABPAQ06546 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.87□□□□□ -1.31
GABPAQ06546 HMGB1P42-201ENST00000532126 553 ntBASIC6.87□□□□□ -1.31
GABPAQ06546 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.87□□□□□ -1.31
GABPAQ06546 MIR4505-201ENST00000582238 73 ntBASIC6.87□□□□□ -1.31
GABPAQ06546 AL049767.1-202ENST00000637826 242 ntBASIC6.87□□□□□ -1.31
GABPAQ06546 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
GABPAQ06546 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
GABPAQ06546 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
GABPAQ06546 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.87□□□□□ -1.31
GABPAQ06546 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
GABPAQ06546 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
GABPAQ06546 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.87□□□□□ -1.31
GABPAQ06546 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
GABPAQ06546 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.87□□□□□ -1.31
GABPAQ06546 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
GABPAQ06546 AC107980.1-201ENST00000558671 3355 ntBASIC6.86□□□□□ -1.31
GABPAQ06546 CASC19-243ENST00000641588 1546 ntBASIC6.86□□□□□ -1.31
GABPAQ06546 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
GABPAQ06546 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.86□□□□□ -1.31
GABPAQ06546 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
GABPAQ06546 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
GABPAQ06546 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
GABPAQ06546 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
GABPAQ06546 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
GABPAQ06546 RNA5SP132-201ENST00000364725 118 ntBASIC6.86□□□□□ -1.31
GABPAQ06546 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.86□□□□□ -1.31
GABPAQ06546 AL391422.1-201ENST00000402155 436 ntBASIC6.86□□□□□ -1.31
GABPAQ06546 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.86□□□□□ -1.31
GABPAQ06546 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC6.86□□□□□ -1.31
GABPAQ06546 AL513325.1-201ENST00000417716 1034 ntBASIC6.86□□□□□ -1.31
GABPAQ06546 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.86□□□□□ -1.31
GABPAQ06546 Z84478.1-201ENST00000438230 1219 ntBASIC6.86□□□□□ -1.31
GABPAQ06546 AC023141.8-201ENST00000442554 208 ntBASIC6.86□□□□□ -1.31
GABPAQ06546 RPL17P2-201ENST00000491913 451 ntBASIC6.86□□□□□ -1.31
GABPAQ06546 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.86□□□□□ -1.31
GABPAQ06546 RN7SKP288-201ENST00000516227 268 ntBASIC6.86□□□□□ -1.31
GABPAQ06546 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.86□□□□□ -1.31
GABPAQ06546 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.86□□□□□ -1.31
GABPAQ06546 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.86□□□□□ -1.31
GABPAQ06546 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
GABPAQ06546 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.86□□□□□ -1.31
GABPAQ06546 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.86□□□□□ -1.31
GABPAQ06546 AC063977.5-201ENST00000601044 974 ntBASIC6.86□□□□□ -1.31
GABPAQ06546 FO393422.1-201ENST00000603908 708 ntBASIC6.86□□□□□ -1.31
GABPAQ06546 AL589674.2-201ENST00000604304 337 ntBASIC6.86□□□□□ -1.31
GABPAQ06546 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
GABPAQ06546 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.86□□□□□ -1.31
GABPAQ06546 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
GABPAQ06546 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
GABPAQ06546 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
GABPAQ06546 EPS15P1-202ENST00000459691 2071 ntBASIC6.86□□□□□ -1.31
GABPAQ06546 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.86□□□□□ -1.31
GABPAQ06546 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
GABPAQ06546 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.86□□□□□ -1.31
GABPAQ06546 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
GABPAQ06546 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
GABPAQ06546 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.86□□□□□ -1.31
GABPAQ06546 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.86□□□□□ -1.31
GABPAQ06546 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
GABPAQ06546 BRD7P6-201ENST00000431406 1860 ntBASIC6.85□□□□□ -1.31
GABPAQ06546 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
GABPAQ06546 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
GABPAQ06546 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
GABPAQ06546 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.85□□□□□ -1.31
GABPAQ06546 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
GABPAQ06546 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.85□□□□□ -1.31
GABPAQ06546 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
GABPAQ06546 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
GABPAQ06546 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
GABPAQ06546 OR2W4P-201ENST00000406496 926 ntBASIC6.85□□□□□ -1.31
GABPAQ06546 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.85□□□□□ -1.31
GABPAQ06546 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.85□□□□□ -1.31
GABPAQ06546 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.85□□□□□ -1.31
GABPAQ06546 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
GABPAQ06546 AC004129.2-201ENST00000457229 287 ntBASIC6.85□□□□□ -1.31
GABPAQ06546 RPS3AP15-201ENST00000483874 781 ntBASIC6.85□□□□□ -1.31
GABPAQ06546 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC6.85□□□□□ -1.31
GABPAQ06546 AC021678.3-201ENST00000517893 476 ntBASIC6.85□□□□□ -1.31
GABPAQ06546 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.85□□□□□ -1.31
GABPAQ06546 AC090022.1-201ENST00000546569 311 ntBASIC6.85□□□□□ -1.31
GABPAQ06546 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.85□□□□□ -1.31
GABPAQ06546 AC096996.1-201ENST00000563813 325 ntBASIC6.85□□□□□ -1.31
GABPAQ06546 AC244517.3-201ENST00000616254 1235 ntBASIC6.85□□□□□ -1.31
GABPAQ06546 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.85□□□□□ -1.31
GABPAQ06546 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.85□□□□□ -1.31
GABPAQ06546 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.85□□□□□ -1.31
GABPAQ06546 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
GABPAQ06546 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.85□□□□□ -1.31
GABPAQ06546 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
GABPAQ06546 AP002833.3-201ENST00000625075 2265 ntBASIC6.85□□□□□ -1.31
GABPAQ06546 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.85□□□□□ -1.31
GABPAQ06546 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
GABPAQ06546 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms