Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
HMGCS2P54868 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.76□□□□□ -1.33
HMGCS2P54868 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
HMGCS2P54868 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HMGCS2P54868 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.76□□□□□ -1.33
HMGCS2P54868 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
HMGCS2P54868 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HMGCS2P54868 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HMGCS2P54868 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HMGCS2P54868 PARN-201ENST00000341484 2100 ntTSL 2 BASIC6.76□□□□□ -1.33
HMGCS2P54868 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC6.76□□□□□ -1.33
HMGCS2P54868 AL049634.1-201ENST00000453770 1720 ntBASIC6.76□□□□□ -1.33
HMGCS2P54868 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.76□□□□□ -1.33
HMGCS2P54868 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
HMGCS2P54868 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
HMGCS2P54868 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.75□□□□□ -1.33
HMGCS2P54868 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HMGCS2P54868 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HMGCS2P54868 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.75□□□□□ -1.33
HMGCS2P54868 AL159987.1-201ENST00000347911 293 ntBASIC6.75□□□□□ -1.33
HMGCS2P54868 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.75□□□□□ -1.33
HMGCS2P54868 RNU4-34P-201ENST00000410431 124 ntBASIC6.75□□□□□ -1.33
HMGCS2P54868 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.75□□□□□ -1.33
HMGCS2P54868 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.75□□□□□ -1.33
HMGCS2P54868 AL606490.1-201ENST00000452266 765 ntBASIC6.75□□□□□ -1.33
HMGCS2P54868 PFN1P6-201ENST00000476786 399 ntBASIC6.75□□□□□ -1.33
HMGCS2P54868 OR5M14P-201ENST00000506803 618 ntBASIC6.75□□□□□ -1.33
HMGCS2P54868 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HMGCS2P54868 AC139365.2-201ENST00000517972 253 ntBASIC6.75□□□□□ -1.33
HMGCS2P54868 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.75□□□□□ -1.33
HMGCS2P54868 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.75□□□□□ -1.33
HMGCS2P54868 AC103968.1-201ENST00000557841 573 ntBASIC6.75□□□□□ -1.33
HMGCS2P54868 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.75□□□□□ -1.33
HMGCS2P54868 AC044860.2-201ENST00000561005 179 ntBASIC6.75□□□□□ -1.33
HMGCS2P54868 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.75□□□□□ -1.33
HMGCS2P54868 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
HMGCS2P54868 TMEM75-201ENST00000624314 2165 ntBASIC6.75□□□□□ -1.33
HMGCS2P54868 AL590763.1-201ENST00000398297 1545 ntBASIC6.75□□□□□ -1.33
HMGCS2P54868 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HMGCS2P54868 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC6.75□□□□□ -1.33
HMGCS2P54868 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
HMGCS2P54868 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HMGCS2P54868 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
HMGCS2P54868 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.74□□□□□ -1.33
HMGCS2P54868 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HMGCS2P54868 AC025470.1-201ENST00000510053 2032 ntBASIC6.74□□□□□ -1.33
HMGCS2P54868 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.74□□□□□ -1.33
HMGCS2P54868 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.74□□□□□ -1.33
HMGCS2P54868 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.74□□□□□ -1.33
HMGCS2P54868 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
HMGCS2P54868 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.74□□□□□ -1.33
HMGCS2P54868 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC6.74□□□□□ -1.33
HMGCS2P54868 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
HMGCS2P54868 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
HMGCS2P54868 RN7SKP151-201ENST00000410230 316 ntBASIC6.74□□□□□ -1.33
HMGCS2P54868 RPL35AP24-201ENST00000413846 330 ntBASIC6.74□□□□□ -1.33
HMGCS2P54868 AC113412.1-201ENST00000425840 504 ntBASIC6.74□□□□□ -1.33
HMGCS2P54868 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.74□□□□□ -1.33
HMGCS2P54868 RANP1-206ENST00000455094 651 ntBASIC6.74□□□□□ -1.33
HMGCS2P54868 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.74□□□□□ -1.33
HMGCS2P54868 RPL38P3-201ENST00000484463 213 ntBASIC6.74□□□□□ -1.33
HMGCS2P54868 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.74□□□□□ -1.33
HMGCS2P54868 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.74□□□□□ -1.33
HMGCS2P54868 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.74□□□□□ -1.33
HMGCS2P54868 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.74□□□□□ -1.33
HMGCS2P54868 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.74□□□□□ -1.33
HMGCS2P54868 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.74□□□□□ -1.33
HMGCS2P54868 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.74□□□□□ -1.33
HMGCS2P54868 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.74□□□□□ -1.33
HMGCS2P54868 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.74□□□□□ -1.33
HMGCS2P54868 AC005840.5-201ENST00000619166 599 ntBASIC6.74□□□□□ -1.33
HMGCS2P54868 MIR6730-201ENST00000622213 67 ntBASIC6.74□□□□□ -1.33
HMGCS2P54868 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6.74□□□□□ -1.33
HMGCS2P54868 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.74□□□□□ -1.33
HMGCS2P54868 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HMGCS2P54868 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HMGCS2P54868 AC053481.2-202ENST00000582394 1500 ntBASIC6.74□□□□□ -1.33
HMGCS2P54868 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HMGCS2P54868 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HMGCS2P54868 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
HMGCS2P54868 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HMGCS2P54868 THAP12P9-201ENST00000503971 2360 ntBASIC6.74□□□□□ -1.33
HMGCS2P54868 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
HMGCS2P54868 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HMGCS2P54868 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
HMGCS2P54868 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HMGCS2P54868 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
HMGCS2P54868 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HMGCS2P54868 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HMGCS2P54868 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
HMGCS2P54868 IMMTP1-201ENST00000435590 2219 ntBASIC6.73□□□□□ -1.33
HMGCS2P54868 AC010329.1-201ENST00000593903 8328 ntBASIC6.73□□□□□ -1.33
HMGCS2P54868 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HMGCS2P54868 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.73□□□□□ -1.33
HMGCS2P54868 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.73□□□□□ -1.33
HMGCS2P54868 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HMGCS2P54868 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
HMGCS2P54868 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC6.73□□□□□ -1.33
HMGCS2P54868 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC6.73□□□□□ -1.33
HMGCS2P54868 AL121768.1-201ENST00000613917 2544 ntBASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms