Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
ATN1P54259 SUN1-205ENST00000405266 4062 ntTSL 5 BASIC9.45□□□□□ -0.9
ATN1P54259 EEF1A1P10-201ENST00000475365 1390 ntBASIC9.45□□□□□ -0.9
ATN1P54259 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
ATN1P54259 RAB13-205ENST00000614713 1353 ntTSL 5 BASIC9.45□□□□□ -0.9
ATN1P54259 MPP7-203ENST00000375732 5063 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
ATN1P54259 SLC9B2-201ENST00000362026 2300 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
ATN1P54259 ACLY-202ENST00000353196 4318 ntAPPRIS ALT1 TSL 5 BASIC9.45□□□□□ -0.9
ATN1P54259 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
ATN1P54259 AHNAK2-204ENST00000557457 3436 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
ATN1P54259 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC9.45□□□□□ -0.9
ATN1P54259 CDR1-202ENST00000625883 1485 ntBASIC9.45□□□□□ -0.9
ATN1P54259 NCOA4-207ENST00000585132 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
ATN1P54259 LINC00461-212ENST00000511014 3539 ntTSL 2 BASIC9.45□□□□□ -0.9
ATN1P54259 TCTN3-203ENST00000371217 2514 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
ATN1P54259 WDR95P-201ENST00000425638 1542 ntBASIC9.45□□□□□ -0.9
ATN1P54259 ATP5BP1-201ENST00000411980 1574 ntBASIC9.45□□□□□ -0.9
ATN1P54259 DOCK8-209ENST00000469391 6386 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
ATN1P54259 KCNMA1-214ENST00000434208 4055 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
ATN1P54259 CACNB2-209ENST00000396576 4464 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
ATN1P54259 FDFT1-212ENST00000528643 1909 ntTSL 2 BASIC9.44□□□□□ -0.9
ATN1P54259 TMOD1-203ENST00000395211 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
ATN1P54259 AC135731.2-201ENST00000603029 2098 ntBASIC9.44□□□□□ -0.9
ATN1P54259 LAMA3-207ENST00000587184 5007 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
ATN1P54259 MXI1-203ENST00000361248 2188 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
ATN1P54259 DNAH11-201ENST00000328843 13917 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
ATN1P54259 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
ATN1P54259 UNC5C-201ENST00000453304 9875 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
ATN1P54259 STAT2-210ENST00000557235 3073 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
ATN1P54259 AC012409.5-201ENST00000624746 3424 ntBASIC9.44□□□□□ -0.9
ATN1P54259 OTOA-202ENST00000388956 3466 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
ATN1P54259 OR1F1-201ENST00000304646 942 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
ATN1P54259 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
ATN1P54259 Y_RNA.100-201ENST00000363141 102 ntBASIC9.44□□□□□ -0.9
ATN1P54259 RNU6-740P-201ENST00000364734 105 ntBASIC9.44□□□□□ -0.9
ATN1P54259 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
ATN1P54259 CSNK2B-202ENST00000375866 936 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
ATN1P54259 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
ATN1P54259 CD3D-202ENST00000392884 476 ntTSL 2 BASIC9.44□□□□□ -0.9
ATN1P54259 AC121334.1-201ENST00000396414 802 ntBASIC9.44□□□□□ -0.9
ATN1P54259 MSRB1P1-201ENST00000396851 354 ntBASIC9.44□□□□□ -0.9
ATN1P54259 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC9.44□□□□□ -0.9
ATN1P54259 AL513302.1-201ENST00000415679 428 ntBASIC9.44□□□□□ -0.9
ATN1P54259 RPL21P91-201ENST00000429231 479 ntBASIC9.44□□□□□ -0.9
ATN1P54259 HMGB1P9-201ENST00000429856 646 ntBASIC9.44□□□□□ -0.9
ATN1P54259 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC9.44□□□□□ -0.9
ATN1P54259 IQCF4-204ENST00000433169 414 ntTSL 3 BASIC9.44□□□□□ -0.9
ATN1P54259 SUMO2P8-201ENST00000434672 286 ntBASIC9.44□□□□□ -0.9
ATN1P54259 AL356276.2-201ENST00000435919 558 ntBASIC9.44□□□□□ -0.9
ATN1P54259 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC9.44□□□□□ -0.9
ATN1P54259 AL135908.1-202ENST00000454135 562 ntTSL 2 BASIC9.44□□□□□ -0.9
ATN1P54259 PRELID3BP1-201ENST00000457142 540 ntBASIC9.44□□□□□ -0.9
ATN1P54259 AC097460.2-201ENST00000511857 741 ntBASIC9.44□□□□□ -0.9
ATN1P54259 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC9.44□□□□□ -0.9
ATN1P54259 GNGT2-206ENST00000515635 783 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
ATN1P54259 SNORA48.10-201ENST00000516965 160 ntBASIC9.44□□□□□ -0.9
ATN1P54259 AP000911.4-201ENST00000532272 516 ntTSL 4 BASIC9.44□□□□□ -0.9
ATN1P54259 NDFIP1P1-201ENST00000543144 525 ntBASIC9.44□□□□□ -0.9
ATN1P54259 NMNAT1P1-201ENST00000554095 876 ntBASIC9.44□□□□□ -0.9
ATN1P54259 AC013452.1-201ENST00000560630 598 ntBASIC9.44□□□□□ -0.9
ATN1P54259 AC009117.1-201ENST00000563948 554 ntBASIC9.44□□□□□ -0.9
ATN1P54259 MIR4793-201ENST00000577502 87 ntBASIC9.44□□□□□ -0.9
ATN1P54259 AC025198.1-201ENST00000578331 419 ntBASIC9.44□□□□□ -0.9
ATN1P54259 MIR3159-201ENST00000584572 74 ntBASIC9.44□□□□□ -0.9
ATN1P54259 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC9.44□□□□□ -0.9
ATN1P54259 DTNA-220ENST00000590831 847 ntTSL 2 BASIC9.44□□□□□ -0.9
ATN1P54259 AC010719.1-201ENST00000602992 747 ntBASIC9.44□□□□□ -0.9
ATN1P54259 AL359999.1-201ENST00000604513 294 ntBASIC9.44□□□□□ -0.9
ATN1P54259 AP005329.3-201ENST00000609924 686 ntBASIC9.44□□□□□ -0.9
ATN1P54259 AC007485.1-201ENST00000616755 206 ntBASIC9.44□□□□□ -0.9
ATN1P54259 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC9.44□□□□□ -0.9
ATN1P54259 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC9.44□□□□□ -0.9
ATN1P54259 AC012594.1-254ENST00000628002 438 ntTSL 5 BASIC9.44□□□□□ -0.9
ATN1P54259 TBC1D8B-206ENST00000481617 4098 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
ATN1P54259 DTNA-209ENST00000556414 1626 ntTSL 2 BASIC9.44□□□□□ -0.9
ATN1P54259 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
ATN1P54259 PCBP1-AS1-243ENST00000458698 1893 ntTSL 3 BASIC9.44□□□□□ -0.9
ATN1P54259 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC9.44□□□□□ -0.9
ATN1P54259 LGSN-201ENST00000370657 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
ATN1P54259 PSG5-205ENST00000404580 2145 ntTSL 2 BASIC9.44□□□□□ -0.9
ATN1P54259 HCG18-240ENST00000454269 2430 ntTSL 2 BASIC9.44□□□□□ -0.9
ATN1P54259 C16orf62-205ENST00000513947 2501 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
ATN1P54259 RAE1-202ENST00000395840 2602 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
ATN1P54259 MATN2-208ENST00000520016 3495 ntAPPRIS P4 TSL 1 (best) BASIC9.44□□□□□ -0.9
ATN1P54259 C1QTNF7-204ENST00000429690 4464 ntAPPRIS P1 TSL 4 BASIC9.44□□□□□ -0.9
ATN1P54259 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC9.44□□□□□ -0.9
ATN1P54259 ZNF259P1-202ENST00000572422 4912 ntBASIC9.43□□□□□ -0.9
ATN1P54259 PHACTR1-205ENST00000379350 4784 ntTSL 2 BASIC9.43□□□□□ -0.9
ATN1P54259 PTK2B-201ENST00000346049 4147 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
ATN1P54259 SORL1-204ENST00000525532 3836 ntTSL 2 BASIC9.43□□□□□ -0.9
ATN1P54259 NRXN3-202ENST00000335750 2764 ntTSL 5 BASIC9.43□□□□□ -0.9
ATN1P54259 TRAPPC2-201ENST00000359680 2716 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
ATN1P54259 DMP1-201ENST00000282479 2634 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
ATN1P54259 NKD1-201ENST00000268459 17105 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
ATN1P54259 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
ATN1P54259 TBC1D22A-AS1-202ENST00000640274 1951 ntBASIC9.43□□□□□ -0.9
ATN1P54259 IKZF3-207ENST00000377944 1669 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
ATN1P54259 IKZF3-208ENST00000377945 1696 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
ATN1P54259 SPP1-201ENST00000237623 1581 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
ATN1P54259 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC9.43□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 228.9 ms