Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 IGHVIII-76-1-201ENST00000523776 286 ntBASIC7.11□□□□□ -1.27
NUP98P52948 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC7.11□□□□□ -1.27
NUP98P52948 AC126177.5-201ENST00000549599 178 ntBASIC7.11□□□□□ -1.27
NUP98P52948 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NUP98P52948 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC7.11□□□□□ -1.27
NUP98P52948 AC008536.1-201ENST00000602872 669 ntBASIC7.11□□□□□ -1.27
NUP98P52948 AL121612.2-201ENST00000612261 482 ntBASIC7.11□□□□□ -1.27
NUP98P52948 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC7.11□□□□□ -1.27
NUP98P52948 MIR7155-201ENST00000615925 56 ntBASIC7.11□□□□□ -1.27
NUP98P52948 AC008115.4-201ENST00000619780 775 ntBASIC7.11□□□□□ -1.27
NUP98P52948 AP002505.2-201ENST00000623585 696 ntBASIC7.11□□□□□ -1.27
NUP98P52948 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC7.11□□□□□ -1.27
NUP98P52948 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NUP98P52948 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC7.1□□□□□ -1.27
NUP98P52948 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
NUP98P52948 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NUP98P52948 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NUP98P52948 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC7.1□□□□□ -1.27
NUP98P52948 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NUP98P52948 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NUP98P52948 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
NUP98P52948 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
NUP98P52948 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
NUP98P52948 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
NUP98P52948 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NUP98P52948 RMRPP5-201ENST00000411156 267 ntBASIC7.1□□□□□ -1.27
NUP98P52948 NPM1P22-201ENST00000427761 952 ntBASIC7.1□□□□□ -1.27
NUP98P52948 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC7.1□□□□□ -1.27
NUP98P52948 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC7.1□□□□□ -1.27
NUP98P52948 RPL17P2-201ENST00000491913 451 ntBASIC7.1□□□□□ -1.27
NUP98P52948 DUTP1-201ENST00000493631 470 ntBASIC7.1□□□□□ -1.27
NUP98P52948 AC253576.1-201ENST00000511645 1156 ntBASIC7.1□□□□□ -1.27
NUP98P52948 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC7.1□□□□□ -1.27
NUP98P52948 AL049872.1-201ENST00000556323 322 ntBASIC7.1□□□□□ -1.27
NUP98P52948 AC020763.5-201ENST00000623298 430 ntBASIC7.1□□□□□ -1.27
NUP98P52948 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
NUP98P52948 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
NUP98P52948 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
NUP98P52948 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC7.1□□□□□ -1.27
NUP98P52948 AL592429.1-201ENST00000403909 1473 ntBASIC7.1□□□□□ -1.27
NUP98P52948 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
NUP98P52948 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
NUP98P52948 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
NUP98P52948 FIGN-202ENST00000409634 746 ntTSL 5 BASIC7.09□□□□□ -1.27
NUP98P52948 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NUP98P52948 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC7.09□□□□□ -1.27
NUP98P52948 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC7.09□□□□□ -1.27
NUP98P52948 AL163952.1-202ENST00000569625 600 ntBASIC7.09□□□□□ -1.27
NUP98P52948 AC092944.2-201ENST00000605443 889 ntBASIC7.09□□□□□ -1.27
NUP98P52948 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC7.09□□□□□ -1.27
NUP98P52948 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC7.09□□□□□ -1.27
NUP98P52948 AC079776.5-201ENST00000641920 211 ntBASIC7.09□□□□□ -1.27
NUP98P52948 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC7.09□□□□□ -1.27
NUP98P52948 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
NUP98P52948 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
NUP98P52948 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NUP98P52948 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
NUP98P52948 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
NUP98P52948 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
NUP98P52948 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
NUP98P52948 AL359195.2-201ENST00000623657 4412 ntBASIC7.09□□□□□ -1.27
NUP98P52948 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC7.09□□□□□ -1.27
NUP98P52948 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.09□□□□□ -1.27
NUP98P52948 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
NUP98P52948 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
NUP98P52948 ERG-202ENST00000398897 4651 ntTSL 5 BASIC7.09□□□□□ -1.28
NUP98P52948 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.28
NUP98P52948 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
NUP98P52948 RNA5SP335-201ENST00000363817 110 ntBASIC7.08□□□□□ -1.28
NUP98P52948 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC7.08□□□□□ -1.28
NUP98P52948 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC7.08□□□□□ -1.28
NUP98P52948 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC7.08□□□□□ -1.28
NUP98P52948 OR10G5P-201ENST00000532733 358 ntBASIC7.08□□□□□ -1.28
NUP98P52948 AC126915.2-201ENST00000610957 190 ntBASIC7.08□□□□□ -1.28
NUP98P52948 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC7.08□□□□□ -1.28
NUP98P52948 RPSAP73-201ENST00000614820 330 ntBASIC7.08□□□□□ -1.28
NUP98P52948 AC037198.3-201ENST00000616754 526 ntBASIC7.08□□□□□ -1.28
NUP98P52948 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC7.08□□□□□ -1.28
NUP98P52948 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC7.08□□□□□ -1.28
NUP98P52948 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.08□□□□□ -1.28
NUP98P52948 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NUP98P52948 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NUP98P52948 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
NUP98P52948 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NUP98P52948 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NUP98P52948 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NUP98P52948 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
NUP98P52948 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NUP98P52948 LDHAP2-201ENST00000437325 985 ntBASIC7.08□□□□□ -1.28
NUP98P52948 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC7.08□□□□□ -1.28
NUP98P52948 RN7SL329P-201ENST00000467740 299 ntBASIC7.08□□□□□ -1.28
NUP98P52948 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC7.08□□□□□ -1.28
NUP98P52948 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
NUP98P52948 NMNAT1P5-201ENST00000559657 841 ntBASIC7.08□□□□□ -1.28
NUP98P52948 CASC22-201ENST00000569713 386 ntTSL 5 BASIC7.08□□□□□ -1.28
NUP98P52948 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC7.08□□□□□ -1.28
NUP98P52948 CDC42EP3P1-201ENST00000601004 764 ntBASIC7.08□□□□□ -1.28
NUP98P52948 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC7.08□□□□□ -1.28
NUP98P52948 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
NUP98P52948 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms