Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.29□□□□□ -1.4
BRCC3P46736 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
BRCC3P46736 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.29□□□□□ -1.4
BRCC3P46736 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC6.29□□□□□ -1.4
BRCC3P46736 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.29□□□□□ -1.4
BRCC3P46736 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.29□□□□□ -1.4
BRCC3P46736 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.29□□□□□ -1.4
BRCC3P46736 AP001496.3-201ENST00000580230 913 ntBASIC6.29□□□□□ -1.4
BRCC3P46736 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.29□□□□□ -1.4
BRCC3P46736 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.29□□□□□ -1.4
BRCC3P46736 FAM72A-208ENST00000607379 1139 ntBASIC6.29□□□□□ -1.4
BRCC3P46736 AP000894.4-201ENST00000610185 483 ntBASIC6.29□□□□□ -1.4
BRCC3P46736 AL137246.2-201ENST00000613439 662 ntBASIC6.29□□□□□ -1.4
BRCC3P46736 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.29□□□□□ -1.4
BRCC3P46736 AL139099.4-201ENST00000614802 114 ntBASIC6.29□□□□□ -1.4
BRCC3P46736 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
BRCC3P46736 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
BRCC3P46736 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
BRCC3P46736 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
BRCC3P46736 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
BRCC3P46736 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
BRCC3P46736 XKRY2-202ENST00000623874 1581 ntBASIC6.28□□□□□ -1.4
BRCC3P46736 XKRY-202ENST00000624960 1581 ntBASIC6.28□□□□□ -1.4
BRCC3P46736 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
BRCC3P46736 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
BRCC3P46736 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
BRCC3P46736 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.28□□□□□ -1.4
BRCC3P46736 AL513325.1-201ENST00000417716 1034 ntBASIC6.28□□□□□ -1.4
BRCC3P46736 HMGB3P24-201ENST00000433260 622 ntBASIC6.28□□□□□ -1.4
BRCC3P46736 AL731534.1-201ENST00000434711 269 ntBASIC6.28□□□□□ -1.4
BRCC3P46736 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.28□□□□□ -1.4
BRCC3P46736 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.28□□□□□ -1.4
BRCC3P46736 RPSAP37-201ENST00000470913 821 ntBASIC6.28□□□□□ -1.4
BRCC3P46736 CYP4F27P-201ENST00000514557 494 ntBASIC6.28□□□□□ -1.4
BRCC3P46736 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.28□□□□□ -1.4
BRCC3P46736 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.28□□□□□ -1.4
BRCC3P46736 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.28□□□□□ -1.4
BRCC3P46736 AC090651.1-201ENST00000567865 634 ntBASIC6.28□□□□□ -1.4
BRCC3P46736 AC010547.6-201ENST00000571789 193 ntBASIC6.28□□□□□ -1.4
BRCC3P46736 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.28□□□□□ -1.4
BRCC3P46736 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.28□□□□□ -1.4
BRCC3P46736 AL352984.2-201ENST00000611153 546 ntBASIC6.28□□□□□ -1.4
BRCC3P46736 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.28□□□□□ -1.4
BRCC3P46736 AC022919.1-201ENST00000624979 626 ntBASIC6.28□□□□□ -1.4
BRCC3P46736 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.28□□□□□ -1.4
BRCC3P46736 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
BRCC3P46736 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
BRCC3P46736 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.28□□□□□ -1.4
BRCC3P46736 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.28□□□□□ -1.4
BRCC3P46736 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
BRCC3P46736 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
BRCC3P46736 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.28□□□□□ -1.4
BRCC3P46736 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
BRCC3P46736 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
BRCC3P46736 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
BRCC3P46736 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
BRCC3P46736 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.27□□□□□ -1.41
BRCC3P46736 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
BRCC3P46736 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.27□□□□□ -1.41
BRCC3P46736 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
BRCC3P46736 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.27□□□□□ -1.41
BRCC3P46736 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
BRCC3P46736 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
BRCC3P46736 AC007998.4-201ENST00000612496 2533 ntBASIC6.27□□□□□ -1.41
BRCC3P46736 AL731532.1-201ENST00000623972 4236 ntBASIC6.27□□□□□ -1.41
BRCC3P46736 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
BRCC3P46736 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
BRCC3P46736 AL451142.1-201ENST00000375867 775 ntBASIC6.27□□□□□ -1.41
BRCC3P46736 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
BRCC3P46736 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
BRCC3P46736 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
BRCC3P46736 AC015977.1-201ENST00000418887 292 ntBASIC6.27□□□□□ -1.41
BRCC3P46736 AK4P4-201ENST00000419465 646 ntBASIC6.27□□□□□ -1.41
BRCC3P46736 AL662874.1-201ENST00000426065 230 ntBASIC6.27□□□□□ -1.41
BRCC3P46736 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
BRCC3P46736 CUBNP2-201ENST00000443534 1139 ntBASIC6.27□□□□□ -1.41
BRCC3P46736 RPL7L1P3-201ENST00000455249 689 ntBASIC6.27□□□□□ -1.41
BRCC3P46736 RPS27AP2-201ENST00000457576 465 ntBASIC6.27□□□□□ -1.41
BRCC3P46736 RPSAP39-201ENST00000467439 883 ntBASIC6.27□□□□□ -1.41
BRCC3P46736 AC099521.1-201ENST00000482557 334 ntBASIC6.27□□□□□ -1.41
BRCC3P46736 RN7SKP288-201ENST00000516227 268 ntBASIC6.27□□□□□ -1.41
BRCC3P46736 TMEM97P2-201ENST00000517841 403 ntBASIC6.27□□□□□ -1.41
BRCC3P46736 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.27□□□□□ -1.41
BRCC3P46736 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.27□□□□□ -1.41
BRCC3P46736 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.27□□□□□ -1.41
BRCC3P46736 RN7SL544P-201ENST00000617232 284 ntBASIC6.27□□□□□ -1.41
BRCC3P46736 RN7SL763P-201ENST00000620922 284 ntBASIC6.27□□□□□ -1.41
BRCC3P46736 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
BRCC3P46736 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.27□□□□□ -1.41
BRCC3P46736 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.27□□□□□ -1.41
BRCC3P46736 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.27□□□□□ -1.41
BRCC3P46736 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
BRCC3P46736 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
BRCC3P46736 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
BRCC3P46736 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
BRCC3P46736 THAP12P9-201ENST00000503971 2360 ntBASIC6.26□□□□□ -1.41
BRCC3P46736 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
BRCC3P46736 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
BRCC3P46736 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
BRCC3P46736 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms