Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC016769.4-201ENST00000616893 535 ntBASIC7.5□□□□□ -1.21
COL15A1P39059 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC7.5□□□□□ -1.21
COL15A1P39059 AC087269.2-201ENST00000641764 975 ntBASIC7.5□□□□□ -1.21
COL15A1P39059 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
COL15A1P39059 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
COL15A1P39059 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
COL15A1P39059 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC7.5□□□□□ -1.21
COL15A1P39059 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
COL15A1P39059 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
COL15A1P39059 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
COL15A1P39059 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC7.5□□□□□ -1.21
COL15A1P39059 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
COL15A1P39059 AC241584.2-201ENST00000637142 2090 ntBASIC7.5□□□□□ -1.21
COL15A1P39059 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
COL15A1P39059 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
COL15A1P39059 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
COL15A1P39059 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
COL15A1P39059 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
COL15A1P39059 ZNF840P-201ENST00000504759 1996 ntBASIC7.49□□□□□ -1.21
COL15A1P39059 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL15A1P39059 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
COL15A1P39059 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC7.49□□□□□ -1.21
COL15A1P39059 AC093829.1-201ENST00000506662 1618 ntBASIC7.49□□□□□ -1.21
COL15A1P39059 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL15A1P39059 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
COL15A1P39059 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
COL15A1P39059 FIGN-202ENST00000409634 746 ntTSL 5 BASIC7.49□□□□□ -1.21
COL15A1P39059 TNPO1P1-201ENST00000423641 1138 ntBASIC7.49□□□□□ -1.21
COL15A1P39059 AC099677.3-201ENST00000427081 395 ntBASIC7.49□□□□□ -1.21
COL15A1P39059 AL022331.1-201ENST00000429025 477 ntBASIC7.49□□□□□ -1.21
COL15A1P39059 CFL1P1-202ENST00000432948 411 ntBASIC7.49□□□□□ -1.21
COL15A1P39059 AC012075.1-201ENST00000436549 580 ntBASIC7.49□□□□□ -1.21
COL15A1P39059 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC7.49□□□□□ -1.21
COL15A1P39059 RAB28P2-201ENST00000454299 641 ntBASIC7.49□□□□□ -1.21
COL15A1P39059 RPL23AP40-201ENST00000487630 390 ntBASIC7.49□□□□□ -1.21
COL15A1P39059 RPL32P9-201ENST00000487963 407 ntBASIC7.49□□□□□ -1.21
COL15A1P39059 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC7.49□□□□□ -1.21
COL15A1P39059 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC7.49□□□□□ -1.21
COL15A1P39059 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC7.49□□□□□ -1.21
COL15A1P39059 HMGB1P42-201ENST00000532126 553 ntBASIC7.49□□□□□ -1.21
COL15A1P39059 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC7.49□□□□□ -1.21
COL15A1P39059 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC7.49□□□□□ -1.21
COL15A1P39059 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC7.49□□□□□ -1.21
COL15A1P39059 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC7.49□□□□□ -1.21
COL15A1P39059 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC7.49□□□□□ -1.21
COL15A1P39059 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC7.49□□□□□ -1.21
COL15A1P39059 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC7.49□□□□□ -1.21
COL15A1P39059 AC008536.1-201ENST00000602872 669 ntBASIC7.49□□□□□ -1.21
COL15A1P39059 AL139099.4-201ENST00000614802 114 ntBASIC7.49□□□□□ -1.21
COL15A1P39059 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.49□□□□□ -1.21
COL15A1P39059 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL15A1P39059 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC7.49□□□□□ -1.21
COL15A1P39059 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL15A1P39059 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC7.49□□□□□ -1.21
COL15A1P39059 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
COL15A1P39059 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC7.49□□□□□ -1.21
COL15A1P39059 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
COL15A1P39059 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL15A1P39059 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
COL15A1P39059 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
COL15A1P39059 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC7.49□□□□□ -1.21
COL15A1P39059 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL15A1P39059 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC7.48□□□□□ -1.21
COL15A1P39059 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
COL15A1P39059 MTND5P12-201ENST00000502851 1449 ntBASIC7.48□□□□□ -1.21
COL15A1P39059 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
COL15A1P39059 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC7.48□□□□□ -1.21
COL15A1P39059 RNA5SP251-201ENST00000410614 137 ntBASIC7.48□□□□□ -1.21
COL15A1P39059 MYL6P5-201ENST00000412707 459 ntBASIC7.48□□□□□ -1.21
COL15A1P39059 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC7.48□□□□□ -1.21
COL15A1P39059 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC7.48□□□□□ -1.21
COL15A1P39059 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC7.48□□□□□ -1.21
COL15A1P39059 AC016027.5-201ENST00000427227 210 ntBASIC7.48□□□□□ -1.21
COL15A1P39059 NPM1P22-201ENST00000427761 952 ntBASIC7.48□□□□□ -1.21
COL15A1P39059 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC7.48□□□□□ -1.21
COL15A1P39059 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC7.48□□□□□ -1.21
COL15A1P39059 RPL17P2-201ENST00000491913 451 ntBASIC7.48□□□□□ -1.21
COL15A1P39059 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC7.48□□□□□ -1.21
COL15A1P39059 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC7.48□□□□□ -1.21
COL15A1P39059 AC006499.3-201ENST00000506077 748 ntBASIC7.48□□□□□ -1.21
COL15A1P39059 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC7.48□□□□□ -1.21
COL15A1P39059 BX510359.5-201ENST00000515651 304 ntBASIC7.48□□□□□ -1.21
COL15A1P39059 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
COL15A1P39059 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC7.48□□□□□ -1.21
COL15A1P39059 MIR1269B-201ENST00000580405 75 ntBASIC7.48□□□□□ -1.21
COL15A1P39059 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC7.48□□□□□ -1.21
COL15A1P39059 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC7.48□□□□□ -1.21
COL15A1P39059 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
COL15A1P39059 AP003072.5-201ENST00000623872 773 ntBASIC7.48□□□□□ -1.21
COL15A1P39059 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC7.48□□□□□ -1.21
COL15A1P39059 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC7.48□□□□□ -1.21
COL15A1P39059 AL590763.1-201ENST00000398297 1545 ntBASIC7.48□□□□□ -1.21
COL15A1P39059 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL15A1P39059 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
COL15A1P39059 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
COL15A1P39059 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
COL15A1P39059 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.48□□□□□ -1.21
COL15A1P39059 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL15A1P39059 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
COL15A1P39059 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms