Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CHRNA3P32297 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CHRNA3P32297 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CHRNA3P32297 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.27□□□□□ -1.41
CHRNA3P32297 QRSL1P1-201ENST00000400977 1540 ntBASIC6.27□□□□□ -1.41
CHRNA3P32297 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.27□□□□□ -1.41
CHRNA3P32297 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CHRNA3P32297 SNORA21-201ENST00000362423 132 ntBASIC6.27□□□□□ -1.41
CHRNA3P32297 RN7SKP275-201ENST00000364626 301 ntBASIC6.27□□□□□ -1.41
CHRNA3P32297 AC004386.1-201ENST00000393214 761 ntBASIC6.27□□□□□ -1.41
CHRNA3P32297 AL354868.1-201ENST00000417077 482 ntBASIC6.27□□□□□ -1.41
CHRNA3P32297 RPS15AP30-201ENST00000420976 390 ntBASIC6.27□□□□□ -1.41
CHRNA3P32297 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.27□□□□□ -1.41
CHRNA3P32297 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
CHRNA3P32297 AC023141.3-201ENST00000436698 278 ntBASIC6.27□□□□□ -1.41
CHRNA3P32297 AL353662.1-201ENST00000439099 327 ntBASIC6.27□□□□□ -1.41
CHRNA3P32297 RPS10P18-201ENST00000442662 495 ntBASIC6.27□□□□□ -1.41
CHRNA3P32297 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.27□□□□□ -1.41
CHRNA3P32297 AC002553.3-201ENST00000453002 341 ntBASIC6.27□□□□□ -1.41
CHRNA3P32297 RN7SKP288-201ENST00000516227 268 ntBASIC6.27□□□□□ -1.41
CHRNA3P32297 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.27□□□□□ -1.41
CHRNA3P32297 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.27□□□□□ -1.41
CHRNA3P32297 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.27□□□□□ -1.41
CHRNA3P32297 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.27□□□□□ -1.41
CHRNA3P32297 AC073333.2-201ENST00000603589 769 ntBASIC6.27□□□□□ -1.41
CHRNA3P32297 AL512652.1-201ENST00000619006 500 ntBASIC6.27□□□□□ -1.41
CHRNA3P32297 AL157762.1-201ENST00000619612 415 ntBASIC6.27□□□□□ -1.41
CHRNA3P32297 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.27□□□□□ -1.41
CHRNA3P32297 AL354854.1-201ENST00000455940 1363 ntBASIC6.27□□□□□ -1.41
CHRNA3P32297 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CHRNA3P32297 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
CHRNA3P32297 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.27□□□□□ -1.41
CHRNA3P32297 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CHRNA3P32297 AC130304.1-201ENST00000622942 2385 ntBASIC6.26□□□□□ -1.41
CHRNA3P32297 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CHRNA3P32297 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CHRNA3P32297 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CHRNA3P32297 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CHRNA3P32297 AL158152.1-201ENST00000602652 1435 ntBASIC6.26□□□□□ -1.41
CHRNA3P32297 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
CHRNA3P32297 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
CHRNA3P32297 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
CHRNA3P32297 AC087516.1-201ENST00000561236 2428 ntBASIC6.26□□□□□ -1.41
CHRNA3P32297 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CHRNA3P32297 AC020656.2-201ENST00000613291 5309 ntBASIC6.26□□□□□ -1.41
CHRNA3P32297 BX284613.1-201ENST00000452221 1641 ntBASIC6.26□□□□□ -1.41
CHRNA3P32297 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CHRNA3P32297 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
CHRNA3P32297 AC138907.8-201ENST00000623981 2256 ntBASIC6.26□□□□□ -1.41
CHRNA3P32297 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CHRNA3P32297 RNU1-134P-201ENST00000362935 165 ntBASIC6.26□□□□□ -1.41
CHRNA3P32297 U3.10-201ENST00000364459 214 ntBASIC6.26□□□□□ -1.41
CHRNA3P32297 RNU105B-201ENST00000364478 208 ntBASIC6.26□□□□□ -1.41
CHRNA3P32297 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CHRNA3P32297 AL050305.1-201ENST00000399993 1230 ntBASIC6.26□□□□□ -1.41
CHRNA3P32297 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CHRNA3P32297 RNA5SP156-201ENST00000410250 110 ntBASIC6.26□□□□□ -1.41
CHRNA3P32297 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.26□□□□□ -1.41
CHRNA3P32297 KCTD9P1-201ENST00000430462 1167 ntBASIC6.26□□□□□ -1.41
CHRNA3P32297 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.26□□□□□ -1.41
CHRNA3P32297 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.26□□□□□ -1.41
CHRNA3P32297 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.26□□□□□ -1.41
CHRNA3P32297 RSU1P1-201ENST00000453416 441 ntBASIC6.26□□□□□ -1.41
CHRNA3P32297 PPIAP27-201ENST00000453800 265 ntBASIC6.26□□□□□ -1.41
CHRNA3P32297 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.26□□□□□ -1.41
CHRNA3P32297 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.26□□□□□ -1.41
CHRNA3P32297 AC098847.1-201ENST00000473094 348 ntBASIC6.26□□□□□ -1.41
CHRNA3P32297 RN7SL284P-201ENST00000498823 275 ntBASIC6.26□□□□□ -1.41
CHRNA3P32297 LSM3P4-201ENST00000502948 309 ntBASIC6.26□□□□□ -1.41
CHRNA3P32297 LDHAP1-201ENST00000509421 992 ntBASIC6.26□□□□□ -1.41
CHRNA3P32297 CR383658.1-201ENST00000514609 734 ntBASIC6.26□□□□□ -1.41
CHRNA3P32297 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.26□□□□□ -1.41
CHRNA3P32297 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CHRNA3P32297 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC6.26□□□□□ -1.41
CHRNA3P32297 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CHRNA3P32297 CYCSP38-201ENST00000559840 322 ntBASIC6.26□□□□□ -1.41
CHRNA3P32297 AC007346.2-201ENST00000564816 892 ntBASIC6.26□□□□□ -1.41
CHRNA3P32297 AC090826.1-203ENST00000569235 490 ntBASIC6.26□□□□□ -1.41
CHRNA3P32297 AC090286.3-201ENST00000573133 187 ntBASIC6.26□□□□□ -1.41
CHRNA3P32297 AC005726.4-201ENST00000582858 458 ntBASIC6.26□□□□□ -1.41
CHRNA3P32297 AC008507.3-201ENST00000585753 472 ntBASIC6.26□□□□□ -1.41
CHRNA3P32297 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.26□□□□□ -1.41
CHRNA3P32297 AC004801.6-201ENST00000616571 978 ntBASIC6.26□□□□□ -1.41
CHRNA3P32297 MIR6861-201ENST00000618657 64 ntBASIC6.26□□□□□ -1.41
CHRNA3P32297 SNX18P12-201ENST00000624821 759 ntBASIC6.26□□□□□ -1.41
CHRNA3P32297 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.26□□□□□ -1.41
CHRNA3P32297 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CHRNA3P32297 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CHRNA3P32297 ZNF402P-201ENST00000404435 3100 ntBASIC6.26□□□□□ -1.41
CHRNA3P32297 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CHRNA3P32297 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
CHRNA3P32297 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CHRNA3P32297 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.26□□□□□ -1.41
CHRNA3P32297 AC004656.1-201ENST00000568479 4951 ntBASIC6.26□□□□□ -1.41
CHRNA3P32297 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.26□□□□□ -1.41
CHRNA3P32297 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CHRNA3P32297 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CHRNA3P32297 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.25□□□□□ -1.41
CHRNA3P32297 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CHRNA3P32297 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms