Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC9.2□□□□□ -0.94
CLIP1P30622 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC9.2□□□□□ -0.94
CLIP1P30622 AL365220.1-201ENST00000432923 399 ntBASIC9.2□□□□□ -0.94
CLIP1P30622 AC073410.1-201ENST00000435125 589 ntBASIC9.2□□□□□ -0.94
CLIP1P30622 OR7E116P-201ENST00000448529 957 ntBASIC9.2□□□□□ -0.94
CLIP1P30622 RNA5SP34-201ENST00000516887 130 ntBASIC9.2□□□□□ -0.94
CLIP1P30622 SNORA43.3-201ENST00000517240 103 ntBASIC9.2□□□□□ -0.94
CLIP1P30622 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC9.2□□□□□ -0.94
CLIP1P30622 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC9.2□□□□□ -0.94
CLIP1P30622 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC9.2□□□□□ -0.94
CLIP1P30622 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CLIP1P30622 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC9.2□□□□□ -0.94
CLIP1P30622 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CLIP1P30622 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
CLIP1P30622 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
CLIP1P30622 LINC01963-201ENST00000562038 3148 ntBASIC9.2□□□□□ -0.94
CLIP1P30622 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC9.2□□□□□ -0.94
CLIP1P30622 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
CLIP1P30622 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
CLIP1P30622 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
CLIP1P30622 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC9.19□□□□□ -0.94
CLIP1P30622 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CLIP1P30622 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
CLIP1P30622 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
CLIP1P30622 RNA5SP234-201ENST00000363916 119 ntBASIC9.19□□□□□ -0.94
CLIP1P30622 SNORA58B-201ENST00000364259 136 ntBASIC9.19□□□□□ -0.94
CLIP1P30622 MIR105-2-201ENST00000385083 81 ntBASIC9.19□□□□□ -0.94
CLIP1P30622 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
CLIP1P30622 NIFKP3-201ENST00000417799 865 ntBASIC9.19□□□□□ -0.94
CLIP1P30622 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC9.19□□□□□ -0.94
CLIP1P30622 Z84478.1-201ENST00000438230 1219 ntBASIC9.19□□□□□ -0.94
CLIP1P30622 LRRC37A14P-201ENST00000452297 462 ntBASIC9.19□□□□□ -0.94
CLIP1P30622 AC011225.1-201ENST00000457751 369 ntBASIC9.19□□□□□ -0.94
CLIP1P30622 OARD1-211ENST00000480585 829 ntTSL 3 BASIC9.19□□□□□ -0.94
CLIP1P30622 RN7SL570P-201ENST00000484405 292 ntBASIC9.19□□□□□ -0.94
CLIP1P30622 AC108693.1-201ENST00000496068 432 ntBASIC9.19□□□□□ -0.94
CLIP1P30622 DUTP7-201ENST00000507982 486 ntBASIC9.19□□□□□ -0.94
CLIP1P30622 AC109481.1-201ENST00000509173 282 ntBASIC9.19□□□□□ -0.94
CLIP1P30622 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC9.19□□□□□ -0.94
CLIP1P30622 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC9.19□□□□□ -0.94
CLIP1P30622 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC9.19□□□□□ -0.94
CLIP1P30622 AL121594.2-201ENST00000541658 472 ntBASIC9.19□□□□□ -0.94
CLIP1P30622 DCN-210ENST00000547568 823 ntTSL 3 BASIC9.19□□□□□ -0.94
CLIP1P30622 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC9.19□□□□□ -0.94
CLIP1P30622 AC007346.2-201ENST00000564816 892 ntBASIC9.19□□□□□ -0.94
CLIP1P30622 MIR4260-201ENST00000583107 67 ntBASIC9.19□□□□□ -0.94
CLIP1P30622 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC9.19□□□□□ -0.94
CLIP1P30622 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC9.19□□□□□ -0.94
CLIP1P30622 AC063977.5-201ENST00000601044 974 ntBASIC9.19□□□□□ -0.94
CLIP1P30622 HOTTIP_3.1-201ENST00000619957 337 ntBASIC9.19□□□□□ -0.94
CLIP1P30622 WDR75-207ENST00000631047 270 ntTSL 5 BASIC9.19□□□□□ -0.94
CLIP1P30622 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CLIP1P30622 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CLIP1P30622 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC9.19□□□□□ -0.94
CLIP1P30622 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC9.19□□□□□ -0.94
CLIP1P30622 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
CLIP1P30622 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CLIP1P30622 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC9.19□□□□□ -0.94
CLIP1P30622 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
CLIP1P30622 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
CLIP1P30622 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
CLIP1P30622 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CLIP1P30622 AC068769.1-201ENST00000474767 2426 ntBASIC9.18□□□□□ -0.94
CLIP1P30622 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CLIP1P30622 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC9.18□□□□□ -0.94
CLIP1P30622 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
CLIP1P30622 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC9.18□□□□□ -0.94
CLIP1P30622 AK3P5-201ENST00000432033 519 ntBASIC9.18□□□□□ -0.94
CLIP1P30622 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC9.18□□□□□ -0.94
CLIP1P30622 AL133445.1-201ENST00000467051 452 ntBASIC9.18□□□□□ -0.94
CLIP1P30622 SIAH1P1-201ENST00000479411 923 ntBASIC9.18□□□□□ -0.94
CLIP1P30622 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC9.18□□□□□ -0.94
CLIP1P30622 ATG10-208ENST00000513634 618 ntTSL 2 BASIC9.18□□□□□ -0.94
CLIP1P30622 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC9.18□□□□□ -0.94
CLIP1P30622 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC9.18□□□□□ -0.94
CLIP1P30622 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC9.18□□□□□ -0.94
CLIP1P30622 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC9.18□□□□□ -0.94
CLIP1P30622 GMFG-212ENST00000602185 423 ntTSL 3 BASIC9.18□□□□□ -0.94
CLIP1P30622 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC9.18□□□□□ -0.94
CLIP1P30622 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC9.18□□□□□ -0.94
CLIP1P30622 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC9.18□□□□□ -0.94
CLIP1P30622 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC9.18□□□□□ -0.94
CLIP1P30622 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC9.18□□□□□ -0.94
CLIP1P30622 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
CLIP1P30622 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
CLIP1P30622 DMD-222ENST00000474231 5209 ntTSL 5 BASIC9.17□□□□□ -0.94
CLIP1P30622 PRNCR1-201ENST00000635449 12727 ntBASIC9.17□□□□□ -0.94
CLIP1P30622 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CLIP1P30622 ZNF840P-201ENST00000504759 1996 ntBASIC9.17□□□□□ -0.94
CLIP1P30622 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC9.17□□□□□ -0.94
CLIP1P30622 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
CLIP1P30622 RN7SKP124-201ENST00000364730 341 ntBASIC9.17□□□□□ -0.94
CLIP1P30622 RNA5SP131-201ENST00000365452 119 ntBASIC9.17□□□□□ -0.94
CLIP1P30622 USP24P1-201ENST00000433802 779 ntBASIC9.17□□□□□ -0.94
CLIP1P30622 AL627308.1-201ENST00000435693 821 ntBASIC9.17□□□□□ -0.94
CLIP1P30622 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC9.17□□□□□ -0.94
CLIP1P30622 AC027026.1-201ENST00000532323 742 ntBASIC9.17□□□□□ -0.94
CLIP1P30622 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC9.17□□□□□ -0.94
CLIP1P30622 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
CLIP1P30622 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC9.17□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms