Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.62□□□□□ -1.51
COL5A1P20908 AC007494.1-201ENST00000562293 760 ntBASIC5.62□□□□□ -1.51
COL5A1P20908 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.62□□□□□ -1.51
COL5A1P20908 AL121612.2-201ENST00000612261 482 ntBASIC5.62□□□□□ -1.51
COL5A1P20908 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.62□□□□□ -1.51
COL5A1P20908 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.62□□□□□ -1.51
COL5A1P20908 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL5A1P20908 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.61□□□□□ -1.51
COL5A1P20908 SRRM1P3-201ENST00000426911 2678 ntBASIC5.61□□□□□ -1.51
COL5A1P20908 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL5A1P20908 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.61□□□□□ -1.51
COL5A1P20908 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC5.61□□□□□ -1.51
COL5A1P20908 AC007842.1-201ENST00000597336 2039 ntBASIC5.61□□□□□ -1.51
COL5A1P20908 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL5A1P20908 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.61□□□□□ -1.51
COL5A1P20908 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
COL5A1P20908 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
COL5A1P20908 AL592429.1-201ENST00000403909 1473 ntBASIC5.61□□□□□ -1.51
COL5A1P20908 GAPDHP24-201ENST00000328713 983 ntBASIC5.61□□□□□ -1.51
COL5A1P20908 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL5A1P20908 AL133270.1-201ENST00000402635 279 ntBASIC5.61□□□□□ -1.51
COL5A1P20908 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.61□□□□□ -1.51
COL5A1P20908 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.61□□□□□ -1.51
COL5A1P20908 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.61□□□□□ -1.51
COL5A1P20908 AL450023.1-201ENST00000450868 751 ntBASIC5.61□□□□□ -1.51
COL5A1P20908 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.61□□□□□ -1.51
COL5A1P20908 AC021146.10-201ENST00000515628 706 ntBASIC5.61□□□□□ -1.51
COL5A1P20908 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.61□□□□□ -1.51
COL5A1P20908 AC004825.1-201ENST00000555068 586 ntBASIC5.61□□□□□ -1.51
COL5A1P20908 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.61□□□□□ -1.51
COL5A1P20908 GARSP1-201ENST00000570895 719 ntBASIC5.61□□□□□ -1.51
COL5A1P20908 TAS2R6P-201ENST00000605022 826 ntBASIC5.61□□□□□ -1.51
COL5A1P20908 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.61□□□□□ -1.51
COL5A1P20908 AC068769.1-201ENST00000474767 2426 ntBASIC5.61□□□□□ -1.51
COL5A1P20908 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL5A1P20908 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
COL5A1P20908 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL5A1P20908 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC5.61□□□□□ -1.51
COL5A1P20908 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL5A1P20908 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL5A1P20908 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
COL5A1P20908 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL5A1P20908 AC007938.2-201ENST00000604666 2634 ntBASIC5.61□□□□□ -1.51
COL5A1P20908 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.61□□□□□ -1.51
COL5A1P20908 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.61□□□□□ -1.51
COL5A1P20908 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL5A1P20908 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL5A1P20908 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL5A1P20908 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC5.6□□□□□ -1.51
COL5A1P20908 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC5.6□□□□□ -1.51
COL5A1P20908 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.6□□□□□ -1.51
COL5A1P20908 GAPDHP42-201ENST00000406848 981 ntBASIC5.6□□□□□ -1.51
COL5A1P20908 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.6□□□□□ -1.51
COL5A1P20908 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.6□□□□□ -1.51
COL5A1P20908 RPL35AP19-201ENST00000469425 329 ntBASIC5.6□□□□□ -1.51
COL5A1P20908 RN7SL184P-201ENST00000488308 297 ntBASIC5.6□□□□□ -1.51
COL5A1P20908 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.6□□□□□ -1.51
COL5A1P20908 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.6□□□□□ -1.51
COL5A1P20908 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.6□□□□□ -1.51
COL5A1P20908 AC024589.2-201ENST00000605642 1294 ntBASIC5.6□□□□□ -1.51
COL5A1P20908 AP001784.1-201ENST00000624107 428 ntBASIC5.6□□□□□ -1.51
COL5A1P20908 CASC19-264ENST00000641912 1184 ntBASIC5.6□□□□□ -1.51
COL5A1P20908 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC5.6□□□□□ -1.51
COL5A1P20908 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL5A1P20908 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC5.6□□□□□ -1.51
COL5A1P20908 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL5A1P20908 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL5A1P20908 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL5A1P20908 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
COL5A1P20908 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.6□□□□□ -1.51
COL5A1P20908 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.6□□□□□ -1.51
COL5A1P20908 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.6□□□□□ -1.51
COL5A1P20908 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL5A1P20908 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
COL5A1P20908 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC5.6□□□□□ -1.51
COL5A1P20908 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL5A1P20908 AC114876.1-201ENST00000490962 1366 ntBASIC5.6□□□□□ -1.51
COL5A1P20908 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL5A1P20908 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL5A1P20908 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL5A1P20908 AL589647.1-201ENST00000402485 466 ntBASIC5.6□□□□□ -1.51
COL5A1P20908 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.6□□□□□ -1.51
COL5A1P20908 EIF2S2P3-201ENST00000428356 999 ntBASIC5.6□□□□□ -1.51
COL5A1P20908 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.6□□□□□ -1.51
COL5A1P20908 GSTA7P-201ENST00000438425 448 ntBASIC5.6□□□□□ -1.51
COL5A1P20908 AC005297.1-201ENST00000444765 862 ntBASIC5.6□□□□□ -1.51
COL5A1P20908 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.6□□□□□ -1.51
COL5A1P20908 AL645937.3-201ENST00000453647 936 ntBASIC5.6□□□□□ -1.51
COL5A1P20908 RANP1-206ENST00000455094 651 ntBASIC5.6□□□□□ -1.51
COL5A1P20908 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.6□□□□□ -1.51
COL5A1P20908 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.6□□□□□ -1.51
COL5A1P20908 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.6□□□□□ -1.51
COL5A1P20908 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.6□□□□□ -1.51
COL5A1P20908 HMGN2P6-201ENST00000551091 273 ntBASIC5.6□□□□□ -1.51
COL5A1P20908 AL049872.1-201ENST00000556323 322 ntBASIC5.6□□□□□ -1.51
COL5A1P20908 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.6□□□□□ -1.51
COL5A1P20908 AL049779.3-201ENST00000557141 606 ntBASIC5.6□□□□□ -1.51
COL5A1P20908 MIR132-201ENST00000591554 101 ntBASIC5.6□□□□□ -1.51
COL5A1P20908 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.6□□□□□ -1.51
COL5A1P20908 AL359513.1-201ENST00000614364 557 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 186.1 ms