Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 FRG1DP-201ENST00000635586 771 ntBASIC8□□□□□ -1.13
LMNB1P20700 AL049767.1-202ENST00000637826 242 ntBASIC8□□□□□ -1.13
LMNB1P20700 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC8□□□□□ -1.13
LMNB1P20700 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC8□□□□□ -1.13
LMNB1P20700 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC8□□□□□ -1.13
LMNB1P20700 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC8□□□□□ -1.13
LMNB1P20700 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC8□□□□□ -1.13
LMNB1P20700 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC8□□□□□ -1.13
LMNB1P20700 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
LMNB1P20700 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC8□□□□□ -1.13
LMNB1P20700 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LMNB1P20700 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
LMNB1P20700 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
LMNB1P20700 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC7.99□□□□□ -1.13
LMNB1P20700 AL359396.1-201ENST00000623151 2376 ntBASIC7.99□□□□□ -1.13
LMNB1P20700 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LMNB1P20700 APP-206ENST00000359726 3294 ntTSL 2 BASIC7.99□□□□□ -1.13
LMNB1P20700 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC7.99□□□□□ -1.13
LMNB1P20700 PRNCR1-201ENST00000635449 12727 ntBASIC7.99□□□□□ -1.13
LMNB1P20700 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
LMNB1P20700 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
LMNB1P20700 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
LMNB1P20700 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LMNB1P20700 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LMNB1P20700 RN7SKP62-201ENST00000384539 329 ntBASIC7.99□□□□□ -1.13
LMNB1P20700 U3.25-201ENST00000391209 220 ntBASIC7.99□□□□□ -1.13
LMNB1P20700 Z86062.1-201ENST00000406773 777 ntBASIC7.99□□□□□ -1.13
LMNB1P20700 MIR1178-201ENST00000408396 91 ntBASIC7.99□□□□□ -1.13
LMNB1P20700 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC7.99□□□□□ -1.13
LMNB1P20700 IGLV3-4-201ENST00000432300 244 ntBASIC7.99□□□□□ -1.13
LMNB1P20700 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LMNB1P20700 TUBB4BP6-201ENST00000437576 479 ntBASIC7.99□□□□□ -1.13
LMNB1P20700 KRTAP8-2P-201ENST00000440620 186 ntBASIC7.99□□□□□ -1.13
LMNB1P20700 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
LMNB1P20700 AC044797.1-201ENST00000445744 679 ntBASIC7.99□□□□□ -1.13
LMNB1P20700 HMGB1P26-201ENST00000452520 628 ntBASIC7.99□□□□□ -1.13
LMNB1P20700 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC7.99□□□□□ -1.13
LMNB1P20700 AC023141.9-201ENST00000458734 412 ntBASIC7.99□□□□□ -1.13
LMNB1P20700 AC008379.1-201ENST00000463655 464 ntBASIC7.99□□□□□ -1.13
LMNB1P20700 AC004263.1-201ENST00000479327 332 ntBASIC7.99□□□□□ -1.13
LMNB1P20700 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LMNB1P20700 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC7.99□□□□□ -1.13
LMNB1P20700 SSX6-203ENST00000509958 336 ntTSL 3 BASIC7.99□□□□□ -1.13
LMNB1P20700 MTND1P22-201ENST00000510572 951 ntBASIC7.99□□□□□ -1.13
LMNB1P20700 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC7.99□□□□□ -1.13
LMNB1P20700 OR5H7P-201ENST00000514084 930 ntBASIC7.99□□□□□ -1.13
LMNB1P20700 RNA5SP340-201ENST00000517132 107 ntBASIC7.99□□□□□ -1.13
LMNB1P20700 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC7.99□□□□□ -1.13
LMNB1P20700 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC7.99□□□□□ -1.13
LMNB1P20700 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC7.99□□□□□ -1.13
LMNB1P20700 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC7.99□□□□□ -1.13
LMNB1P20700 AC007938.1-201ENST00000562524 2902 ntBASIC7.99□□□□□ -1.13
LMNB1P20700 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC7.99□□□□□ -1.13
LMNB1P20700 AC007346.1-201ENST00000569208 867 ntBASIC7.99□□□□□ -1.13
LMNB1P20700 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC7.99□□□□□ -1.13
LMNB1P20700 RN7SL208P-201ENST00000577964 296 ntBASIC7.99□□□□□ -1.13
LMNB1P20700 RN7SL404P-201ENST00000582421 281 ntBASIC7.99□□□□□ -1.13
LMNB1P20700 AL139344.1-201ENST00000605228 195 ntBASIC7.99□□□□□ -1.13
LMNB1P20700 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC7.99□□□□□ -1.13
LMNB1P20700 AC091304.6-201ENST00000619761 202 ntBASIC7.99□□□□□ -1.13
LMNB1P20700 AC093875.1-201ENST00000623688 504 ntBASIC7.99□□□□□ -1.13
LMNB1P20700 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC7.99□□□□□ -1.13
LMNB1P20700 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
LMNB1P20700 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.99□□□□□ -1.13
LMNB1P20700 AC122713.2-201ENST00000624942 3335 ntBASIC7.99□□□□□ -1.13
LMNB1P20700 AL359922.2-201ENST00000581788 3017 ntBASIC7.99□□□□□ -1.13
LMNB1P20700 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
LMNB1P20700 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7.99□□□□□ -1.13
LMNB1P20700 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
LMNB1P20700 AP003175.1-201ENST00000641383 6658 ntBASIC7.99□□□□□ -1.13
LMNB1P20700 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LMNB1P20700 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
LMNB1P20700 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
LMNB1P20700 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
LMNB1P20700 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LMNB1P20700 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LMNB1P20700 AC123769.1-201ENST00000530992 3192 ntBASIC7.98□□□□□ -1.13
LMNB1P20700 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC7.98□□□□□ -1.13
LMNB1P20700 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
LMNB1P20700 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.98□□□□□ -1.13
LMNB1P20700 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LMNB1P20700 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LMNB1P20700 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.98□□□□□ -1.13
LMNB1P20700 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC7.98□□□□□ -1.13
LMNB1P20700 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
LMNB1P20700 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC7.98□□□□□ -1.13
LMNB1P20700 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LMNB1P20700 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC7.98□□□□□ -1.13
LMNB1P20700 Y_RNA.318-201ENST00000365131 97 ntBASIC7.98□□□□□ -1.13
LMNB1P20700 RNU6-906P-201ENST00000384700 70 ntBASIC7.98□□□□□ -1.13
LMNB1P20700 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
LMNB1P20700 HMGB3P19-201ENST00000403971 560 ntBASIC7.98□□□□□ -1.13
LMNB1P20700 AL078595.1-201ENST00000404458 226 ntBASIC7.98□□□□□ -1.13
LMNB1P20700 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LMNB1P20700 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC7.98□□□□□ -1.13
LMNB1P20700 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LMNB1P20700 MTCO3P4-201ENST00000419236 787 ntBASIC7.98□□□□□ -1.13
LMNB1P20700 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC7.98□□□□□ -1.13
LMNB1P20700 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC7.98□□□□□ -1.13
LMNB1P20700 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC7.98□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms