Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AC095055.1-201ENST00000603472 1113 ntBASIC7.79□□□□□ -1.16
LIG1P18858 AL078624.2-201ENST00000605063 554 ntBASIC7.79□□□□□ -1.16
LIG1P18858 AC245297.2-201ENST00000610119 565 ntBASIC7.79□□□□□ -1.16
LIG1P18858 AC092106.3-201ENST00000611308 722 ntBASIC7.79□□□□□ -1.16
LIG1P18858 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC7.79□□□□□ -1.16
LIG1P18858 MIR6883-201ENST00000614952 78 ntBASIC7.79□□□□□ -1.16
LIG1P18858 AC007786.3-201ENST00000615154 596 ntBASIC7.79□□□□□ -1.16
LIG1P18858 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC7.79□□□□□ -1.16
LIG1P18858 AL121895.2-201ENST00000619558 447 ntBASIC7.79□□□□□ -1.16
LIG1P18858 AL390318.1-201ENST00000624564 687 ntBASIC7.79□□□□□ -1.16
LIG1P18858 SNX18P10-201ENST00000625014 519 ntBASIC7.79□□□□□ -1.16
LIG1P18858 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
LIG1P18858 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC7.79□□□□□ -1.16
LIG1P18858 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC7.79□□□□□ -1.16
LIG1P18858 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
LIG1P18858 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
LIG1P18858 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC7.79□□□□□ -1.16
LIG1P18858 CR382285.2-201ENST00000624662 1495 ntBASIC7.79□□□□□ -1.16
LIG1P18858 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
LIG1P18858 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
LIG1P18858 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
LIG1P18858 AC007485.2-201ENST00000623493 1667 ntBASIC7.79□□□□□ -1.16
LIG1P18858 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
LIG1P18858 OLMALINC-203ENST00000641087 3779 ntBASIC7.79□□□□□ -1.16
LIG1P18858 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
LIG1P18858 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LIG1P18858 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC7.78□□□□□ -1.16
LIG1P18858 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC7.78□□□□□ -1.16
LIG1P18858 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
LIG1P18858 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LIG1P18858 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC7.78□□□□□ -1.16
LIG1P18858 AC079949.2-201ENST00000617117 2933 ntBASIC7.78□□□□□ -1.16
LIG1P18858 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
LIG1P18858 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
LIG1P18858 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LIG1P18858 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC7.78□□□□□ -1.16
LIG1P18858 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LIG1P18858 OR7E156P-201ENST00000400303 464 ntBASIC7.78□□□□□ -1.16
LIG1P18858 RPL7P58-201ENST00000402913 758 ntBASIC7.78□□□□□ -1.16
LIG1P18858 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LIG1P18858 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC7.78□□□□□ -1.16
LIG1P18858 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC7.78□□□□□ -1.16
LIG1P18858 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC7.78□□□□□ -1.16
LIG1P18858 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC7.78□□□□□ -1.16
LIG1P18858 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC7.78□□□□□ -1.16
LIG1P18858 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LIG1P18858 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC7.78□□□□□ -1.16
LIG1P18858 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC7.78□□□□□ -1.16
LIG1P18858 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC7.78□□□□□ -1.16
LIG1P18858 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LIG1P18858 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC7.78□□□□□ -1.16
LIG1P18858 Z99127.2-201ENST00000441426 334 ntBASIC7.78□□□□□ -1.16
LIG1P18858 HSFY3P-201ENST00000444242 1191 ntBASIC7.78□□□□□ -1.16
LIG1P18858 AL157884.3-201ENST00000448273 1184 ntBASIC7.78□□□□□ -1.16
LIG1P18858 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC7.78□□□□□ -1.16
LIG1P18858 PTGES3P5-201ENST00000455109 434 ntBASIC7.78□□□□□ -1.16
LIG1P18858 SRP68P2-201ENST00000456184 254 ntBASIC7.78□□□□□ -1.16
LIG1P18858 RNU7-157P-201ENST00000459600 66 ntBASIC7.78□□□□□ -1.16
LIG1P18858 RN7SL149P-201ENST00000465197 281 ntBASIC7.78□□□□□ -1.16
LIG1P18858 TECRP2-201ENST00000503270 928 ntBASIC7.78□□□□□ -1.16
LIG1P18858 AC010374.1-201ENST00000503762 1237 ntBASIC7.78□□□□□ -1.16
LIG1P18858 FABP5P6-201ENST00000510588 409 ntBASIC7.78□□□□□ -1.16
LIG1P18858 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LIG1P18858 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC7.78□□□□□ -1.16
LIG1P18858 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC7.78□□□□□ -1.16
LIG1P18858 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC7.78□□□□□ -1.16
LIG1P18858 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC7.78□□□□□ -1.16
LIG1P18858 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC7.78□□□□□ -1.16
LIG1P18858 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC7.78□□□□□ -1.16
LIG1P18858 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC7.78□□□□□ -1.16
LIG1P18858 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC7.78□□□□□ -1.16
LIG1P18858 AL109628.1-201ENST00000556877 366 ntBASIC7.78□□□□□ -1.16
LIG1P18858 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC7.78□□□□□ -1.16
LIG1P18858 MIR744-201ENST00000578242 98 ntBASIC7.78□□□□□ -1.16
LIG1P18858 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC7.78□□□□□ -1.16
LIG1P18858 MIR4428-201ENST00000584884 73 ntBASIC7.78□□□□□ -1.16
LIG1P18858 AC067852.5-201ENST00000589299 310 ntBASIC7.78□□□□□ -1.16
LIG1P18858 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC7.78□□□□□ -1.16
LIG1P18858 OR7E19P-202ENST00000589942 844 ntBASIC7.78□□□□□ -1.16
LIG1P18858 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
LIG1P18858 HIRAP1-201ENST00000605318 787 ntBASIC7.78□□□□□ -1.16
LIG1P18858 AC108673.3-201ENST00000609183 335 ntBASIC7.78□□□□□ -1.16
LIG1P18858 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC7.78□□□□□ -1.16
LIG1P18858 AL352984.2-201ENST00000611153 546 ntBASIC7.78□□□□□ -1.16
LIG1P18858 AL603755.1-201ENST00000619504 163 ntBASIC7.78□□□□□ -1.16
LIG1P18858 AP000676.3-201ENST00000623299 569 ntBASIC7.78□□□□□ -1.16
LIG1P18858 AC009120.7-201ENST00000623452 780 ntBASIC7.78□□□□□ -1.16
LIG1P18858 AC087894.3-201ENST00000623682 349 ntBASIC7.78□□□□□ -1.16
LIG1P18858 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC7.78□□□□□ -1.16
LIG1P18858 USP46-202ENST00000451218 4622 ntTSL 5 BASIC7.78□□□□□ -1.16
LIG1P18858 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LIG1P18858 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC7.78□□□□□ -1.16
LIG1P18858 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC7.78□□□□□ -1.16
LIG1P18858 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LIG1P18858 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
LIG1P18858 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LIG1P18858 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
LIG1P18858 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
LIG1P18858 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
LIG1P18858 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms