Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC9.9□□□□□ -0.82
TOP2AP11388 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
TOP2AP11388 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
TOP2AP11388 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.82
TOP2AP11388 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
TOP2AP11388 TANK-205ENST00000405852 2155 ntTSL 5 BASIC9.9□□□□□ -0.82
TOP2AP11388 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
TOP2AP11388 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC9.9□□□□□ -0.82
TOP2AP11388 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC9.9□□□□□ -0.82
TOP2AP11388 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC9.9□□□□□ -0.82
TOP2AP11388 FABP7P2-201ENST00000429946 379 ntBASIC9.9□□□□□ -0.82
TOP2AP11388 VN1R54P-201ENST00000435210 1049 ntBASIC9.9□□□□□ -0.82
TOP2AP11388 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
TOP2AP11388 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC9.9□□□□□ -0.82
TOP2AP11388 CDH12P4-201ENST00000517835 295 ntBASIC9.9□□□□□ -0.82
TOP2AP11388 CDH12P3-201ENST00000517935 295 ntBASIC9.9□□□□□ -0.82
TOP2AP11388 CDH12P1-201ENST00000518435 295 ntBASIC9.9□□□□□ -0.82
TOP2AP11388 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC9.9□□□□□ -0.82
TOP2AP11388 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
TOP2AP11388 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC9.9□□□□□ -0.82
TOP2AP11388 AC090510.2-201ENST00000617465 629 ntBASIC9.9□□□□□ -0.82
TOP2AP11388 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
TOP2AP11388 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
TOP2AP11388 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC9.9□□□□□ -0.83
TOP2AP11388 AC092724.1-201ENST00000624623 3397 ntBASIC9.9□□□□□ -0.83
TOP2AP11388 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC9.9□□□□□ -0.83
TOP2AP11388 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
TOP2AP11388 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
TOP2AP11388 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
TOP2AP11388 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
TOP2AP11388 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
TOP2AP11388 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
TOP2AP11388 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
TOP2AP11388 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
TOP2AP11388 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC9.89□□□□□ -0.83
TOP2AP11388 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
TOP2AP11388 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC9.89□□□□□ -0.83
TOP2AP11388 RBMY2KP-201ENST00000418221 992 ntBASIC9.89□□□□□ -0.83
TOP2AP11388 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC9.89□□□□□ -0.83
TOP2AP11388 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC9.89□□□□□ -0.83
TOP2AP11388 RNU1-88P-201ENST00000459274 128 ntBASIC9.89□□□□□ -0.83
TOP2AP11388 TRBV5-2-201ENST00000489095 273 ntBASIC9.89□□□□□ -0.83
TOP2AP11388 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC9.89□□□□□ -0.83
TOP2AP11388 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC9.89□□□□□ -0.83
TOP2AP11388 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC9.89□□□□□ -0.83
TOP2AP11388 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC9.89□□□□□ -0.83
TOP2AP11388 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
TOP2AP11388 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC9.89□□□□□ -0.83
TOP2AP11388 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
TOP2AP11388 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
TOP2AP11388 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
TOP2AP11388 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
TOP2AP11388 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
TOP2AP11388 RAD17P2-201ENST00000451754 1977 ntBASIC9.89□□□□□ -0.83
TOP2AP11388 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
TOP2AP11388 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
TOP2AP11388 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
TOP2AP11388 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
TOP2AP11388 AL662795.2-201ENST00000624252 3706 ntBASIC9.88□□□□□ -0.83
TOP2AP11388 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC9.88□□□□□ -0.83
TOP2AP11388 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC9.88□□□□□ -0.83
TOP2AP11388 SNORA16A-201ENST00000384342 137 ntBASIC9.88□□□□□ -0.83
TOP2AP11388 RPS26P13-201ENST00000419030 330 ntBASIC9.88□□□□□ -0.83
TOP2AP11388 AL133325.1-201ENST00000421090 382 ntBASIC9.88□□□□□ -0.83
TOP2AP11388 RPS23P2-201ENST00000463671 415 ntBASIC9.88□□□□□ -0.83
TOP2AP11388 OR1F2P-201ENST00000570470 933 ntBASIC9.88□□□□□ -0.83
TOP2AP11388 AC109583.2-201ENST00000617367 129 ntBASIC9.88□□□□□ -0.83
TOP2AP11388 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC9.88□□□□□ -0.83
TOP2AP11388 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC9.88□□□□□ -0.83
TOP2AP11388 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
TOP2AP11388 PWAR1-201ENST00000624188 2414 ntBASIC9.88□□□□□ -0.83
TOP2AP11388 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC9.88□□□□□ -0.83
TOP2AP11388 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
TOP2AP11388 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
TOP2AP11388 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC9.88□□□□□ -0.83
TOP2AP11388 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC9.88□□□□□ -0.83
TOP2AP11388 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC9.88□□□□□ -0.83
TOP2AP11388 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
TOP2AP11388 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
TOP2AP11388 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC9.88□□□□□ -0.83
TOP2AP11388 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
TOP2AP11388 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC9.87□□□□□ -0.83
TOP2AP11388 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
TOP2AP11388 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
TOP2AP11388 DUTP5-201ENST00000406790 469 ntBASIC9.87□□□□□ -0.83
TOP2AP11388 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC9.87□□□□□ -0.83
TOP2AP11388 AL590762.4-201ENST00000425885 253 ntBASIC9.87□□□□□ -0.83
TOP2AP11388 AC073850.1-201ENST00000449243 255 ntBASIC9.87□□□□□ -0.83
TOP2AP11388 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC9.87□□□□□ -0.83
TOP2AP11388 RNU6-941P-201ENST00000516346 108 ntBASIC9.87□□□□□ -0.83
TOP2AP11388 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
TOP2AP11388 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
TOP2AP11388 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
TOP2AP11388 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC9.87□□□□□ -0.83
TOP2AP11388 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC9.87□□□□□ -0.83
TOP2AP11388 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
TOP2AP11388 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
TOP2AP11388 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
TOP2AP11388 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC9.87□□□□□ -0.83
TOP2AP11388 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms