Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
SPTA1P02549 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SPTA1P02549 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SPTA1P02549 AL023284.3-201ENST00000407767 334 ntBASIC5.43□□□□□ -1.54
SPTA1P02549 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.43□□□□□ -1.54
SPTA1P02549 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.43□□□□□ -1.54
SPTA1P02549 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC5.43□□□□□ -1.54
SPTA1P02549 AC006466.1-201ENST00000438721 289 ntBASIC5.43□□□□□ -1.54
SPTA1P02549 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.43□□□□□ -1.54
SPTA1P02549 AC072052.1-201ENST00000496556 306 ntBASIC5.43□□□□□ -1.54
SPTA1P02549 HIGD1AP14-201ENST00000507617 282 ntBASIC5.43□□□□□ -1.54
SPTA1P02549 CDC42P3-201ENST00000518493 633 ntBASIC5.43□□□□□ -1.54
SPTA1P02549 OR6M2P-201ENST00000529831 871 ntBASIC5.43□□□□□ -1.54
SPTA1P02549 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.43□□□□□ -1.54
SPTA1P02549 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC5.43□□□□□ -1.54
SPTA1P02549 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.43□□□□□ -1.54
SPTA1P02549 AC010624.4-201ENST00000597606 1351 ntBASIC5.43□□□□□ -1.54
SPTA1P02549 CASC19-248ENST00000641674 1356 ntBASIC5.43□□□□□ -1.54
SPTA1P02549 AC100871.1-201ENST00000507871 1456 ntBASIC5.43□□□□□ -1.54
SPTA1P02549 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
SPTA1P02549 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SPTA1P02549 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.43□□□□□ -1.54
SPTA1P02549 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SPTA1P02549 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SPTA1P02549 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
SPTA1P02549 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SPTA1P02549 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.43□□□□□ -1.54
SPTA1P02549 RPS27AP6-201ENST00000427962 448 ntBASIC5.43□□□□□ -1.54
SPTA1P02549 FTLP8-201ENST00000446770 267 ntBASIC5.43□□□□□ -1.54
SPTA1P02549 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.43□□□□□ -1.54
SPTA1P02549 OR7E157P-201ENST00000494376 911 ntBASIC5.43□□□□□ -1.54
SPTA1P02549 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SPTA1P02549 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.43□□□□□ -1.54
SPTA1P02549 COG2-209ENST00000534989 2963 ntTSL 2 BASIC5.43□□□□□ -1.54
SPTA1P02549 AC079075.1-201ENST00000559543 878 ntBASIC5.43□□□□□ -1.54
SPTA1P02549 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.43□□□□□ -1.54
SPTA1P02549 AC063977.5-201ENST00000601044 974 ntBASIC5.43□□□□□ -1.54
SPTA1P02549 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SPTA1P02549 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
SPTA1P02549 SRRM1P3-201ENST00000426911 2678 ntBASIC5.43□□□□□ -1.54
SPTA1P02549 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC5.43□□□□□ -1.54
SPTA1P02549 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SPTA1P02549 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SPTA1P02549 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
SPTA1P02549 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
SPTA1P02549 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.42□□□□□ -1.54
SPTA1P02549 GNL2P1-201ENST00000451274 2190 ntBASIC5.42□□□□□ -1.54
SPTA1P02549 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC5.42□□□□□ -1.54
SPTA1P02549 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SPTA1P02549 U3.2-201ENST00000362981 210 ntBASIC5.42□□□□□ -1.54
SPTA1P02549 RNA5SP478-201ENST00000364657 115 ntBASIC5.42□□□□□ -1.54
SPTA1P02549 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SPTA1P02549 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SPTA1P02549 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.42□□□□□ -1.54
SPTA1P02549 RPS16P5-201ENST00000406501 404 ntBASIC5.42□□□□□ -1.54
SPTA1P02549 AL590139.1-201ENST00000416267 400 ntBASIC5.42□□□□□ -1.54
SPTA1P02549 DUTP4-201ENST00000424782 475 ntBASIC5.42□□□□□ -1.54
SPTA1P02549 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.42□□□□□ -1.54
SPTA1P02549 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.42□□□□□ -1.54
SPTA1P02549 CEACAMP7-201ENST00000444105 496 ntBASIC5.42□□□□□ -1.54
SPTA1P02549 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.42□□□□□ -1.54
SPTA1P02549 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.42□□□□□ -1.54
SPTA1P02549 AC099521.1-201ENST00000482557 334 ntBASIC5.42□□□□□ -1.54
SPTA1P02549 IGLV2-34-201ENST00000490007 283 ntBASIC5.42□□□□□ -1.54
SPTA1P02549 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.42□□□□□ -1.54
SPTA1P02549 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.42□□□□□ -1.54
SPTA1P02549 IGLV3-30-201ENST00000524362 298 ntBASIC5.42□□□□□ -1.54
SPTA1P02549 AP000676.2-201ENST00000529711 301 ntBASIC5.42□□□□□ -1.54
SPTA1P02549 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.42□□□□□ -1.54
SPTA1P02549 TXNP4-201ENST00000575018 310 ntBASIC5.42□□□□□ -1.54
SPTA1P02549 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.42□□□□□ -1.54
SPTA1P02549 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.42□□□□□ -1.54
SPTA1P02549 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
SPTA1P02549 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
SPTA1P02549 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
SPTA1P02549 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
SPTA1P02549 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SPTA1P02549 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SPTA1P02549 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SPTA1P02549 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
SPTA1P02549 AC005332.9-201ENST00000620266 2921 ntBASIC5.42□□□□□ -1.54
SPTA1P02549 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC5.42□□□□□ -1.54
SPTA1P02549 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
SPTA1P02549 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
SPTA1P02549 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SPTA1P02549 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SPTA1P02549 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SPTA1P02549 AC012075.1-201ENST00000436549 580 ntBASIC5.42□□□□□ -1.54
SPTA1P02549 PA2G4P6-201ENST00000438325 1197 ntBASIC5.42□□□□□ -1.54
SPTA1P02549 RANP1-206ENST00000455094 651 ntBASIC5.42□□□□□ -1.54
SPTA1P02549 NDUFA5P9-201ENST00000472609 340 ntBASIC5.42□□□□□ -1.54
SPTA1P02549 AC109481.1-201ENST00000509173 282 ntBASIC5.42□□□□□ -1.54
SPTA1P02549 AC010343.2-201ENST00000510162 224 ntBASIC5.42□□□□□ -1.54
SPTA1P02549 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SPTA1P02549 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.42□□□□□ -1.54
SPTA1P02549 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.42□□□□□ -1.54
SPTA1P02549 AC027229.1-201ENST00000583887 253 ntBASIC5.42□□□□□ -1.54
SPTA1P02549 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.42□□□□□ -1.54
SPTA1P02549 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.42□□□□□ -1.54
SPTA1P02549 AL021918.2-201ENST00000613415 194 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms