Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.37□□□□□ -1.39
TIMP1P01033 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.37□□□□□ -1.39
TIMP1P01033 MIR5095-201ENST00000578844 88 ntBASIC6.37□□□□□ -1.39
TIMP1P01033 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.37□□□□□ -1.39
TIMP1P01033 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.37□□□□□ -1.39
TIMP1P01033 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.37□□□□□ -1.39
TIMP1P01033 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.37□□□□□ -1.39
TIMP1P01033 AC063977.5-201ENST00000601044 974 ntBASIC6.37□□□□□ -1.39
TIMP1P01033 uc_338.26-201ENST00000612659 160 ntBASIC6.37□□□□□ -1.39
TIMP1P01033 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.37□□□□□ -1.39
TIMP1P01033 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.37□□□□□ -1.39
TIMP1P01033 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.37□□□□□ -1.39
TIMP1P01033 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TIMP1P01033 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
TIMP1P01033 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
TIMP1P01033 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TIMP1P01033 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.37□□□□□ -1.39
TIMP1P01033 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.37□□□□□ -1.39
TIMP1P01033 AL137918.1-201ENST00000624542 1922 ntBASIC6.37□□□□□ -1.39
TIMP1P01033 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TIMP1P01033 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TIMP1P01033 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TIMP1P01033 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TIMP1P01033 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
TIMP1P01033 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.36□□□□□ -1.39
TIMP1P01033 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.36□□□□□ -1.39
TIMP1P01033 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC6.36□□□□□ -1.39
TIMP1P01033 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TIMP1P01033 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
TIMP1P01033 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TIMP1P01033 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TIMP1P01033 AL159987.1-201ENST00000347911 293 ntBASIC6.36□□□□□ -1.39
TIMP1P01033 RNA5SP211-201ENST00000365516 117 ntBASIC6.36□□□□□ -1.39
TIMP1P01033 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.36□□□□□ -1.39
TIMP1P01033 AC008171.1-201ENST00000395058 200 ntBASIC6.36□□□□□ -1.39
TIMP1P01033 RN7SKP279-201ENST00000411383 298 ntBASIC6.36□□□□□ -1.39
TIMP1P01033 FABP7P2-201ENST00000429946 379 ntBASIC6.36□□□□□ -1.39
TIMP1P01033 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.36□□□□□ -1.39
TIMP1P01033 AC023141.8-201ENST00000442554 208 ntBASIC6.36□□□□□ -1.39
TIMP1P01033 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.36□□□□□ -1.39
TIMP1P01033 RPL32P33-201ENST00000487023 394 ntBASIC6.36□□□□□ -1.39
TIMP1P01033 CCDC11P1-201ENST00000503137 1162 ntBASIC6.36□□□□□ -1.39
TIMP1P01033 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.36□□□□□ -1.39
TIMP1P01033 TPM3P3-201ENST00000521343 354 ntBASIC6.36□□□□□ -1.39
TIMP1P01033 OR7E158P-201ENST00000524483 910 ntBASIC6.36□□□□□ -1.39
TIMP1P01033 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC6.36□□□□□ -1.39
TIMP1P01033 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
TIMP1P01033 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC6.36□□□□□ -1.39
TIMP1P01033 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
TIMP1P01033 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.36□□□□□ -1.39
TIMP1P01033 AP002884.5-201ENST00000595053 1132 ntBASIC6.36□□□□□ -1.39
TIMP1P01033 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.36□□□□□ -1.39
TIMP1P01033 AL021368.3-201ENST00000607119 578 ntBASIC6.36□□□□□ -1.39
TIMP1P01033 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.36□□□□□ -1.39
TIMP1P01033 AC073342.3-201ENST00000624211 193 ntBASIC6.36□□□□□ -1.39
TIMP1P01033 SAMMSON-209ENST00000641222 1100 ntBASIC6.36□□□□□ -1.39
TIMP1P01033 GTF2IP4-201ENST00000453092 2054 ntBASIC6.36□□□□□ -1.39
TIMP1P01033 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TIMP1P01033 AC092821.2-201ENST00000545710 2042 ntBASIC6.36□□□□□ -1.39
TIMP1P01033 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TIMP1P01033 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC6.36□□□□□ -1.39
TIMP1P01033 AC007938.2-201ENST00000604666 2634 ntBASIC6.36□□□□□ -1.39
TIMP1P01033 AC092692.1-201ENST00000623625 2595 ntBASIC6.36□□□□□ -1.39
TIMP1P01033 AC023421.1-201ENST00000590535 1785 ntBASIC6.36□□□□□ -1.39
TIMP1P01033 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TIMP1P01033 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
TIMP1P01033 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
TIMP1P01033 AC063923.1-201ENST00000478982 1619 ntBASIC6.36□□□□□ -1.39
TIMP1P01033 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
TIMP1P01033 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
TIMP1P01033 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
TIMP1P01033 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
TIMP1P01033 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
TIMP1P01033 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TIMP1P01033 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
TIMP1P01033 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TIMP1P01033 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
TIMP1P01033 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
TIMP1P01033 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.35□□□□□ -1.39
TIMP1P01033 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TIMP1P01033 MIR765-201ENST00000390226 114 ntBASIC6.35□□□□□ -1.39
TIMP1P01033 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.35□□□□□ -1.39
TIMP1P01033 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.35□□□□□ -1.39
TIMP1P01033 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC6.35□□□□□ -1.39
TIMP1P01033 RPS12P17-201ENST00000438591 377 ntBASIC6.35□□□□□ -1.39
TIMP1P01033 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.35□□□□□ -1.39
TIMP1P01033 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TIMP1P01033 AL450023.1-201ENST00000450868 751 ntBASIC6.35□□□□□ -1.39
TIMP1P01033 AURKAPS1-201ENST00000451805 1212 ntBASIC6.35□□□□□ -1.39
TIMP1P01033 SETP4-201ENST00000455717 868 ntBASIC6.35□□□□□ -1.39
TIMP1P01033 RPL7P45-201ENST00000455851 743 ntBASIC6.35□□□□□ -1.39
TIMP1P01033 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.35□□□□□ -1.39
TIMP1P01033 AL157777.1-201ENST00000468100 304 ntBASIC6.35□□□□□ -1.39
TIMP1P01033 RN7SL51P-201ENST00000468230 285 ntBASIC6.35□□□□□ -1.39
TIMP1P01033 RN7SL222P-201ENST00000476452 299 ntBASIC6.35□□□□□ -1.39
TIMP1P01033 AC090638.1-201ENST00000498296 909 ntBASIC6.35□□□□□ -1.39
TIMP1P01033 AC021146.10-201ENST00000515628 706 ntBASIC6.35□□□□□ -1.39
TIMP1P01033 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.35□□□□□ -1.39
TIMP1P01033 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
TIMP1P01033 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms