Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 TCP11X1-202ENST00000622971 1372 ntBASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 RNA5SP321-201ENST00000362722 111 ntBASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 SNORA27.3-201ENST00000364937 134 ntBASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 RNA5SP223-201ENST00000365174 120 ntBASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 SNORA35-201ENST00000386104 128 ntBASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 AL445528.1-201ENST00000426330 420 ntBASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 KCNQ5-AS1-201ENST00000429832 1101 ntTSL 5 BASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 RPE-210ENST00000438204 796 ntTSL 2 BASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 RPS10P3-201ENST00000439253 494 ntBASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 AC005229.2-201ENST00000456995 399 ntBASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 RPS4XP12-201ENST00000461747 709 ntBASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 NPM1P29-201ENST00000483112 803 ntBASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 AC005912.1-201ENST00000495392 255 ntBASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 AC117500.1-201ENST00000497352 755 ntBASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 AC244502.2-201ENST00000543361 851 ntBASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 AC068305.2-201ENST00000550567 1205 ntBASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 MIR4266-201ENST00000583300 55 ntBASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 BOLA2P1-201ENST00000584794 232 ntBASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 AC016957.2-201ENST00000616998 848 ntBASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 TFG-204ENST00000476228 1783 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 U3.10-201ENST00000364459 214 ntBASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 RNU12-2P-201ENST00000364789 156 ntBASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 U3.14-201ENST00000365363 227 ntBASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 OR52N3P-201ENST00000413417 934 ntBASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 AC114878.1-201ENST00000441166 358 ntBASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 RNU6-1218P-201ENST00000458990 108 ntBASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 AC079193.1-201ENST00000460497 588 ntBASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 AC016489.1-201ENST00000461109 375 ntBASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 AC090602.1-201ENST00000469695 252 ntBASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 RPL21P6-201ENST00000479171 504 ntBASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 ADAMTS9-AS2-204ENST00000485174 573 ntTSL 4 BASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 AC073610.1-201ENST00000489971 396 ntBASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 RN7SL182P-201ENST00000496499 300 ntBASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 AL135933.1-201ENST00000498657 802 ntBASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 snoU109.5-201ENST00000516231 132 ntBASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 IGHVIII-38-1-201ENST00000521454 282 ntBASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 IGHVIII-25-1-201ENST00000522143 241 ntBASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 AC021820.1-201ENST00000525564 808 ntBASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 OR7E1P-201ENST00000533891 958 ntBASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 AC008083.2-201ENST00000546707 476 ntBASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 RN7SL25P-201ENST00000583862 260 ntBASIC6.35□□□□□ -1.39
HMGB1P1B2RPK0 AC027229.1-201ENST00000583887 253 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms