Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 AC078795.1-201ENST00000602342 3143 ntBASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 AL034397.3-202ENST00000621933 1815 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 ATP2B1-204ENST00000428670 7032 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 TLR1-202ENST00000502213 2779 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 SLC16A4-206ENST00000472422 2420 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 LINC01358-211ENST00000635571 1687 ntTSL 5 BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 AL359220.1-202ENST00000500036 4499 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 COX6B1P3-201ENST00000312310 260 ntBASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 NOX1-203ENST00000372964 661 ntTSL 2 BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 AC019178.2-201ENST00000423595 505 ntBASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 MTCO2P16-201ENST00000436962 677 ntBASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 CALM1P2-201ENST00000452941 448 ntBASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 SBDSP1-204ENST00000453858 737 ntBASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 NDUFA12P1-201ENST00000455914 406 ntBASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 AC009963.3-201ENST00000458090 486 ntBASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 RN7SL216P-201ENST00000471607 298 ntBASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 IGHVIII-38-1-201ENST00000521454 282 ntBASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 AP000662.1-201ENST00000530952 487 ntBASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 AC079171.1-201ENST00000568788 914 ntBASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 AC125494.3-201ENST00000602759 455 ntBASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 AC121761.2-201ENST00000617300 689 ntBASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 STMN1P1-201ENST00000617809 440 ntBASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 MIR7854-201ENST00000620068 65 ntBASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 AL354702.2-202ENST00000641481 890 ntBASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 APP-209ENST00000440126 2846 ntTSL 2 BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 MITF-203ENST00000328528 4680 ntTSL 5 BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TMEM88BA6NKF7 AC090220.1-201ENST00000593078 1699 ntBASIC8.11□□□□□ -1.11
TMEM88BA6NKF7 LINC00294-201ENST00000631190 3306 ntBASIC8.11□□□□□ -1.11
TMEM88BA6NKF7 KCNJ15-221ENST00000613499 3049 ntAPPRIS P1 TSL 4 BASIC8.11□□□□□ -1.11
TMEM88BA6NKF7 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC8.11□□□□□ -1.11
TMEM88BA6NKF7 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
TMEM88BA6NKF7 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
TMEM88BA6NKF7 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
TMEM88BA6NKF7 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC8.11□□□□□ -1.11
TMEM88BA6NKF7 CEP41-219ENST00000616628 3315 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
TMEM88BA6NKF7 RNU6-553P-201ENST00000364047 96 ntBASIC8.11□□□□□ -1.11
TMEM88BA6NKF7 snoZ40.1-201ENST00000364540 72 ntBASIC8.11□□□□□ -1.11
TMEM88BA6NKF7 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
TMEM88BA6NKF7 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC8.11□□□□□ -1.11
TMEM88BA6NKF7 GEMIN2P2-201ENST00000418195 715 ntBASIC8.11□□□□□ -1.11
TMEM88BA6NKF7 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC8.11□□□□□ -1.11
TMEM88BA6NKF7 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC8.11□□□□□ -1.11
TMEM88BA6NKF7 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC8.11□□□□□ -1.11
TMEM88BA6NKF7 FAM96AP1-201ENST00000430879 482 ntBASIC8.11□□□□□ -1.11
TMEM88BA6NKF7 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC8.11□□□□□ -1.11
TMEM88BA6NKF7 AC129850.1-201ENST00000436203 508 ntBASIC8.11□□□□□ -1.11
TMEM88BA6NKF7 GAPDHP48-201ENST00000436626 961 ntBASIC8.11□□□□□ -1.11
TMEM88BA6NKF7 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC8.11□□□□□ -1.11
TMEM88BA6NKF7 PMS2P9-201ENST00000441237 515 ntBASIC8.11□□□□□ -1.11
TMEM88BA6NKF7 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC8.11□□□□□ -1.11
TMEM88BA6NKF7 TPMTP4-201ENST00000450749 678 ntBASIC8.11□□□□□ -1.11
TMEM88BA6NKF7 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms