Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 AC018638.3-201ENST00000461273 132 ntBASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 IGHV1-14-201ENST00000523391 241 ntBASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 MIR4301-201ENST00000577203 66 ntBASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 AC067852.5-201ENST00000589299 310 ntBASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 AC008521.2-201ENST00000591021 259 ntBASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 AC105148.1-201ENST00000604961 409 ntBASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 AC022905.1-201ENST00000503430 3048 ntBASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 CCAT2-201ENST00000630920 1752 ntBASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 AC008957.3-201ENST00000624112 2242 ntBASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 AC022325.1-201ENST00000502748 2199 ntBASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 RN7SKP78-201ENST00000364711 318 ntBASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 MIR433-201ENST00000384837 93 ntBASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 AC098592.2-201ENST00000413158 265 ntBASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 VN1R31P-201ENST00000417498 730 ntBASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 NPM1P26-201ENST00000426339 738 ntBASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 AC092967.1-201ENST00000449016 481 ntBASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 CFL1P4-201ENST00000451536 498 ntBASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 AP000547.1-201ENST00000454360 617 ntBASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 CST12P-201ENST00000457644 362 ntBASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 AC015908.1-201ENST00000478739 476 ntBASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 AC104109.1-201ENST00000498563 436 ntBASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 RNU6-491P-201ENST00000516099 110 ntBASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 AC060775.1-201ENST00000518241 520 ntBASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 AL121579.2-201ENST00000555466 590 ntBASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 AC233702.7-202ENST00000582941 211 ntBASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 AL671309.1-201ENST00000603750 544 ntBASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 AC084824.5-201ENST00000612009 413 ntBASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 RBMY1HP-201ENST00000382759 1389 ntBASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 AC083899.2-201ENST00000423285 1376 ntBASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TBC1D3FA6NER0 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 AL731556.1-201ENST00000394628 3711 ntBASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TBC1D3FA6NER0 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 350.8 ms