Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 APOBEC3AP1-201ENST00000511396 287 ntBASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 SNORA74.1-201ENST00000516320 180 ntBASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 SOX5P1-201ENST00000524155 1127 ntBASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 AC023310.2-201ENST00000553844 547 ntBASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 AC133794.1-201ENST00000602731 914 ntBASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 AC005034.4-201ENST00000603612 899 ntBASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 SUMO2P14-201ENST00000604488 293 ntBASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 AC091193.1-201ENST00000604640 448 ntBASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 MIR6085-201ENST00000618314 110 ntBASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 AL122023.1-201ENST00000622847 530 ntBASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 AL596275.2-208ENST00000641192 594 ntBASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 TINAG-203ENST00000370869 782 ntTSL 3 BASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 RNU6-925P-201ENST00000384629 104 ntBASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 MIR137-201ENST00000385223 102 ntBASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 AL391419.1-201ENST00000398901 1275 ntBASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 CHMP1B2P-201ENST00000399581 597 ntBASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 AC069282.1-201ENST00000411911 526 ntBASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 FGF12-202ENST00000430714 603 ntTSL 2 BASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 MTCYBP21-201ENST00000443300 1113 ntBASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 EEF1B2P3-201ENST00000447718 678 ntBASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 OR52E7P-201ENST00000452394 933 ntBASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 RARRES2P3-201ENST00000457739 473 ntBASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 RPL32P14-201ENST00000463196 378 ntBASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 AC021205.1-201ENST00000468797 348 ntBASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 H3F3AP5-201ENST00000475267 429 ntBASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 AC020779.1-201ENST00000478757 796 ntBASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 SETP6-201ENST00000479329 568 ntBASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 NPM1P27-201ENST00000502784 830 ntBASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 RN7SL230P-201ENST00000580835 303 ntBASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 AC026898.1-201ENST00000586404 571 ntBASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 IGKV2OR2-1-201ENST00000605129 304 ntBASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 AL135786.2-201ENST00000608422 615 ntBASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 AC068880.4-201ENST00000623082 495 ntBASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 AC015660.5-201ENST00000623238 564 ntBASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 AL132640.3-201ENST00000630473 177 ntBASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 MT-RNR2-201ENST00000387347 1559 ntBASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 RPL31P11-201ENST00000426558 1558 ntBASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 UGT2B26P-201ENST00000508672 1613 ntBASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 AC011455.2-201ENST00000599320 3336 ntBASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 PROS2P-201ENST00000474651 1951 ntBASIC7.19□□□□□ -1.26
COL4A3BPQ9Y5P4 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms