Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 FAM157B-203ENST00000639350 358 ntBASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 ZNF680P1-201ENST00000436625 1469 ntBASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 AC105760.1-201ENST00000244820 2231 ntTSL 2 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC7.59□□□□□ -1.2
PCDHGA11Q9Y5H2 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC7.59□□□□□ -1.2
PCDHGA11Q9Y5H2 AL391262.1-201ENST00000556558 1992 ntBASIC7.59□□□□□ -1.2
PCDHGA11Q9Y5H2 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 FO393401.2-201ENST00000422009 1307 ntTSL 5 BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 OCM-201ENST00000242104 695 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 OR56A4-201ENST00000330728 1209 ntBASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 OR13H1-201ENST00000338616 927 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 OR1J4-201ENST00000340750 942 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 RNU1-47P-201ENST00000362966 163 ntBASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 CSNK2B-202ENST00000375866 936 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 MIR1284-201ENST00000408337 120 ntBASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 HLA-DQB1-AS1-201ENST00000419852 552 ntBASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 CLIC4P3-201ENST00000422221 752 ntBASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 GH2-202ENST00000423893 819 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 AF274573.1-201ENST00000430535 494 ntBASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 RPL7P29-201ENST00000437151 728 ntBASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 CLUHP5-201ENST00000438421 774 ntBASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 AL831737.1-201ENST00000441288 271 ntBASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 TULP3P1-201ENST00000442322 816 ntTSL 3 BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 GH2-204ENST00000456543 794 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 ARPC3P2-201ENST00000457786 533 ntBASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 LINC01944-201ENST00000517916 416 ntTSL 3 BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 IGHV3-63-201ENST00000518422 341 ntBASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 AP003049.2-201ENST00000532992 540 ntTSL 4 BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 TSPAN8-203ENST00000546561 1168 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 LINC02289-202ENST00000556781 861 ntTSL 3 BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 AC091489.2-201ENST00000566263 604 ntBASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 AC105275.2-201ENST00000567907 711 ntBASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 AC068152.1-202ENST00000571901 808 ntTSL 3 BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 FAM106CP-201ENST00000582212 507 ntBASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 AP001004.1-201ENST00000582468 324 ntBASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 AL117336.2-201ENST00000602435 335 ntBASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 BNIP3P9-201ENST00000603714 553 ntBASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 AC010680.3-201ENST00000604215 520 ntBASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 AC026468.1-201ENST00000614981 107 ntBASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 AL731556.2-201ENST00000615610 770 ntBASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 AC011472.4-201ENST00000615848 491 ntBASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 MED15P6-202ENST00000621415 787 ntBASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 AL136221.1-201ENST00000621449 509 ntBASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 PCBP1-AS1-322ENST00000628147 553 ntTSL 5 BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 LINC01358-208ENST00000634569 1030 ntTSL 5 BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 KLF8-206ENST00000640927 1150 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 AC135178.2-201ENST00000582471 3087 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 GTF2H2B-203ENST00000508065 1432 ntBASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 HYDIN2-203ENST00000614586 13885 ntBASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 PIK3C3-204ENST00000586545 1554 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 AC017104.4-201ENST00000636283 1592 ntBASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 SALL4P7-201ENST00000555779 3120 ntBASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 CA1-225ENST00000626824 2405 ntTSL 5 BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 AL034417.4-202ENST00000642135 2236 ntBASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 EPHA7-201ENST00000369297 1885 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHGA11Q9Y5H2 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 410.1 ms