Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC114776.1-201ENST00000414159 4395 ntTSL 5 BASIC8.77□□□□□ -1
ZC3H4Q9UPT8 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC8.77□□□□□ -1
ZC3H4Q9UPT8 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1
ZC3H4Q9UPT8 ERG-205ENST00000398910 4954 ntTSL 5 BASIC8.77□□□□□ -1
ZC3H4Q9UPT8 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC8.77□□□□□ -1
ZC3H4Q9UPT8 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC8.77□□□□□ -1
ZC3H4Q9UPT8 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC8.77□□□□□ -1
ZC3H4Q9UPT8 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
ZC3H4Q9UPT8 TMCC1-AS1-204ENST00000605830 3496 ntTSL 2 BASIC8.77□□□□□ -1
ZC3H4Q9UPT8 FANCD2P2-201ENST00000437591 1400 ntBASIC8.77□□□□□ -1
ZC3H4Q9UPT8 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 PARP1P1-201ENST00000413631 3026 ntBASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 AL133467.3-203ENST00000461160 3574 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 DDX21-201ENST00000354185 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 CCDC77-203ENST00000422000 2338 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 CTAGE3P-201ENST00000454280 2404 ntBASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 SSX3-202ENST00000376893 800 ntTSL 2 BASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 RN7SKP240-201ENST00000410583 375 ntBASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 RNA5SP115-201ENST00000411160 107 ntBASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 AC007899.1-201ENST00000412776 775 ntBASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 ATP5A1P8-201ENST00000423669 1291 ntBASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 MTND1P2-201ENST00000430604 821 ntBASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 AC005189.1-201ENST00000431286 310 ntBASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 MTND3P1-201ENST00000441336 220 ntBASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 AC107015.1-201ENST00000466902 747 ntBASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 AC135999.1-201ENST00000478962 479 ntBASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 B3GNTL1P1-201ENST00000509174 289 ntBASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 AC093816.1-201ENST00000515076 913 ntBASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 RNU6-528P-201ENST00000516926 100 ntBASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 IGKV1OR22-1-201ENST00000521497 360 ntBASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 AP003392.2-201ENST00000527269 208 ntBASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 OLR1-209ENST00000543993 822 ntTSL 2 BASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 ZNF519P3-201ENST00000557158 1032 ntBASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 NMNAT1P5-201ENST00000559657 841 ntBASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 RN7SL667P-201ENST00000582817 298 ntBASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 WISP1-OT1-201ENST00000602893 642 ntBASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 AL451074.6-201ENST00000608512 729 ntBASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 AC007684.1-201ENST00000609671 477 ntBASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 AP000894.4-201ENST00000610185 483 ntBASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 AC092447.7-201ENST00000422212 1621 ntBASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 MAPK10-357ENST00000641831 2858 ntBASIC8.77□□□□□ -1.01
ZC3H4Q9UPT8 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
ZC3H4Q9UPT8 GABRP-201ENST00000265294 3310 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
ZC3H4Q9UPT8 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
ZC3H4Q9UPT8 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
ZC3H4Q9UPT8 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
ZC3H4Q9UPT8 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC8.76□□□□□ -1.01
ZC3H4Q9UPT8 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC8.76□□□□□ -1.01
ZC3H4Q9UPT8 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
ZC3H4Q9UPT8 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC8.76□□□□□ -1.01
ZC3H4Q9UPT8 GRIA2-201ENST00000264426 3445 ntAPPRIS ALT1 TSL 1 (best) BASIC8.76□□□□□ -1.01
ZC3H4Q9UPT8 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
ZC3H4Q9UPT8 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
ZC3H4Q9UPT8 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC8.76□□□□□ -1.01
ZC3H4Q9UPT8 CDY11P-201ENST00000447168 1651 ntBASIC8.76□□□□□ -1.01
ZC3H4Q9UPT8 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC8.76□□□□□ -1.01
ZC3H4Q9UPT8 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
ZC3H4Q9UPT8 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
ZC3H4Q9UPT8 NF1P8-201ENST00000415351 1461 ntBASIC8.76□□□□□ -1.01
ZC3H4Q9UPT8 NXF4-202ENST00000416098 1465 ntBASIC8.76□□□□□ -1.01
ZC3H4Q9UPT8 APP-206ENST00000359726 3294 ntTSL 2 BASIC8.76□□□□□ -1.01
ZC3H4Q9UPT8 AC108099.1-201ENST00000564402 3258 ntBASIC8.76□□□□□ -1.01
ZC3H4Q9UPT8 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
ZC3H4Q9UPT8 IL31RA-206ENST00000447346 2577 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
ZC3H4Q9UPT8 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
ZC3H4Q9UPT8 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
ZC3H4Q9UPT8 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
ZC3H4Q9UPT8 SNORA7A-201ENST00000384765 139 ntBASIC8.76□□□□□ -1.01
ZC3H4Q9UPT8 AL359076.1-201ENST00000426860 420 ntTSL 3 BASIC8.76□□□□□ -1.01
ZC3H4Q9UPT8 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC8.76□□□□□ -1.01
ZC3H4Q9UPT8 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 150.3 ms