Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 AC007159.1-201ENST00000566529 4706 ntBASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
CLCF1Q9UBD9 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 RN7SKP292-201ENST00000365522 317 ntBASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 AL451142.1-201ENST00000375867 775 ntBASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 SNORA17A-201ENST00000391185 133 ntBASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 OR7E101P-201ENST00000400428 513 ntBASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 RPS3AP2-201ENST00000407190 754 ntBASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 TMA16P2-201ENST00000413187 601 ntBASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 LDHAP2-201ENST00000437325 985 ntBASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 SDC4P-201ENST00000453285 601 ntBASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 AC114982.2-201ENST00000461396 358 ntBASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 UBFD1P1-201ENST00000473259 814 ntBASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 CCDC11P1-201ENST00000503137 1162 ntBASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 CYP4F27P-201ENST00000514557 494 ntBASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 IGLVIV-64-201ENST00000518581 301 ntBASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 AC006530.1-201ENST00000555980 571 ntBASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 AC012146.2-201ENST00000576545 416 ntBASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 RPL12P48-201ENST00000605620 304 ntBASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 AP005431.1-201ENST00000618479 319 ntBASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 AL357153.4-201ENST00000620487 1016 ntBASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 SNORA17.5-201ENST00000630429 132 ntBASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 OR8G3P-202ENST00000641572 1255 ntBASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 AC006511.3-201ENST00000624929 1783 ntBASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 AP002512.4-202ENST00000641599 4530 ntBASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLCF1Q9UBD9 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 KARSP1-201ENST00000451871 1752 ntBASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 RN7SKP78-201ENST00000364711 318 ntBASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 RNA5SP211-201ENST00000365516 117 ntBASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 MIR323B-201ENST00000385269 82 ntBASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 AC116036.1-201ENST00000412199 367 ntBASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 MYL6P5-201ENST00000412707 459 ntBASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 AC245060.4-201ENST00000413293 1121 ntBASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 EEF1B2P8-201ENST00000414101 671 ntBASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLCF1Q9UBD9 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms