Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 RELN-203ENST00000428762 11571 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
CHD7Q9P2D1 AP002991.2-201ENST00000623807 2801 ntBASIC5.86□□□□□ -1.47
CHD7Q9P2D1 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
CHD7Q9P2D1 AC093655.2-201ENST00000425735 631 ntBASIC5.86□□□□□ -1.47
CHD7Q9P2D1 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.86□□□□□ -1.47
CHD7Q9P2D1 FAM96AP1-201ENST00000430879 482 ntBASIC5.86□□□□□ -1.47
CHD7Q9P2D1 RPS3AP38-201ENST00000435889 763 ntBASIC5.86□□□□□ -1.47
CHD7Q9P2D1 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.86□□□□□ -1.47
CHD7Q9P2D1 AC092647.3-201ENST00000443044 633 ntBASIC5.86□□□□□ -1.47
CHD7Q9P2D1 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.86□□□□□ -1.47
CHD7Q9P2D1 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.86□□□□□ -1.47
CHD7Q9P2D1 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.86□□□□□ -1.47
CHD7Q9P2D1 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CHD7Q9P2D1 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.86□□□□□ -1.47
CHD7Q9P2D1 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.86□□□□□ -1.47
CHD7Q9P2D1 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.86□□□□□ -1.47
CHD7Q9P2D1 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CHD7Q9P2D1 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CHD7Q9P2D1 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CHD7Q9P2D1 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CHD7Q9P2D1 PIEZO2-201ENST00000302079 9356 ntTSL 5 BASIC5.86□□□□□ -1.47
CHD7Q9P2D1 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
CHD7Q9P2D1 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CHD7Q9P2D1 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
CHD7Q9P2D1 PHLPP2-206ENST00000568954 8317 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CHD7Q9P2D1 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CHD7Q9P2D1 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CHD7Q9P2D1 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CHD7Q9P2D1 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CHD7Q9P2D1 RPS16P5-201ENST00000406501 404 ntBASIC5.85□□□□□ -1.47
CHD7Q9P2D1 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CHD7Q9P2D1 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.85□□□□□ -1.47
CHD7Q9P2D1 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.85□□□□□ -1.47
CHD7Q9P2D1 KNOP1P3-201ENST00000446933 426 ntBASIC5.85□□□□□ -1.47
CHD7Q9P2D1 AC105399.1-202ENST00000447303 205 ntBASIC5.85□□□□□ -1.47
CHD7Q9P2D1 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.85□□□□□ -1.47
CHD7Q9P2D1 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.85□□□□□ -1.47
CHD7Q9P2D1 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC5.85□□□□□ -1.47
CHD7Q9P2D1 IGLV3-24-201ENST00000517477 197 ntBASIC5.85□□□□□ -1.47
CHD7Q9P2D1 AC020937.1-201ENST00000519677 1013 ntBASIC5.85□□□□□ -1.47
CHD7Q9P2D1 AC127381.1-201ENST00000555979 939 ntBASIC5.85□□□□□ -1.47
CHD7Q9P2D1 DPPA3P2-202ENST00000557188 1219 ntBASIC5.85□□□□□ -1.47
CHD7Q9P2D1 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.85□□□□□ -1.47
CHD7Q9P2D1 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC5.85□□□□□ -1.47
CHD7Q9P2D1 OPHN1-201ENST00000355520 7879 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CHD7Q9P2D1 AC026951.1-201ENST00000559530 2459 ntBASIC5.85□□□□□ -1.47
CHD7Q9P2D1 KCNK10-203ENST00000340700 7501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CHD7Q9P2D1 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
CHD7Q9P2D1 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CHD7Q9P2D1 TRPM7-207ENST00000560955 7218 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CHD7Q9P2D1 ARHGEF7-203ENST00000375723 4957 ntTSL 5 BASIC5.85□□□□□ -1.47
CHD7Q9P2D1 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CHD7Q9P2D1 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.85□□□□□ -1.47
CHD7Q9P2D1 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CHD7Q9P2D1 Y_RNA.126-201ENST00000363382 111 ntBASIC5.85□□□□□ -1.47
CHD7Q9P2D1 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CHD7Q9P2D1 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.85□□□□□ -1.47
CHD7Q9P2D1 GTF2IP2-201ENST00000424290 697 ntBASIC5.85□□□□□ -1.47
CHD7Q9P2D1 AC012519.1-201ENST00000424588 610 ntBASIC5.85□□□□□ -1.47
CHD7Q9P2D1 RPL7P11-201ENST00000437586 658 ntBASIC5.85□□□□□ -1.47
CHD7Q9P2D1 RPL7L1P3-201ENST00000455249 689 ntBASIC5.85□□□□□ -1.47
CHD7Q9P2D1 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.85□□□□□ -1.47
CHD7Q9P2D1 AC024940.3-201ENST00000538551 316 ntBASIC5.85□□□□□ -1.47
CHD7Q9P2D1 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.85□□□□□ -1.47
CHD7Q9P2D1 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CHD7Q9P2D1 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CHD7Q9P2D1 KIF13A-213ENST00000636847 5538 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
CHD7Q9P2D1 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.85□□□□□ -1.47
CHD7Q9P2D1 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
CHD7Q9P2D1 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
CHD7Q9P2D1 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC5.85□□□□□ -1.47
CHD7Q9P2D1 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CHD7Q9P2D1 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CHD7Q9P2D1 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC5.85□□□□□ -1.47
CHD7Q9P2D1 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CHD7Q9P2D1 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.85□□□□□ -1.47
CHD7Q9P2D1 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.85□□□□□ -1.47
CHD7Q9P2D1 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.85□□□□□ -1.47
CHD7Q9P2D1 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.85□□□□□ -1.47
CHD7Q9P2D1 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.85□□□□□ -1.47
CHD7Q9P2D1 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
CHD7Q9P2D1 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CHD7Q9P2D1 PRICKLE1-213ENST00000639589 5761 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CHD7Q9P2D1 MIPEPP2-201ENST00000422560 1819 ntBASIC5.84□□□□□ -1.47
CHD7Q9P2D1 KNOP1-201ENST00000219837 6432 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CHD7Q9P2D1 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.84□□□□□ -1.47
CHD7Q9P2D1 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CHD7Q9P2D1 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.84□□□□□ -1.47
CHD7Q9P2D1 FBXL20-201ENST00000264658 10388 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CHD7Q9P2D1 AL353795.3-201ENST00000624351 5702 ntBASIC5.84□□□□□ -1.47
CHD7Q9P2D1 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CHD7Q9P2D1 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.84□□□□□ -1.47
CHD7Q9P2D1 FP325330.3-201ENST00000623760 9537 ntBASIC5.84□□□□□ -1.47
CHD7Q9P2D1 ST3GAL1-201ENST00000399640 6764 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CHD7Q9P2D1 RNU1-146P-201ENST00000364015 165 ntBASIC5.84□□□□□ -1.47
CHD7Q9P2D1 MIR640-201ENST00000385086 96 ntBASIC5.84□□□□□ -1.47
CHD7Q9P2D1 AC007161.1-204ENST00000423039 460 ntBASIC5.84□□□□□ -1.47
CHD7Q9P2D1 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.84□□□□□ -1.47
CHD7Q9P2D1 RPL7AP28-201ENST00000464513 571 ntBASIC5.84□□□□□ -1.47
CHD7Q9P2D1 NDUFA5P9-201ENST00000472609 340 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms