Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC88CQ9P219 AC103703.1-201ENST00000634783 663 ntBASIC5.64□□□□□ -1.51
CCDC88CQ9P219 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC88CQ9P219 AL355377.1-201ENST00000621125 1653 ntBASIC5.64□□□□□ -1.51
CCDC88CQ9P219 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC88CQ9P219 AC016583.1-201ENST00000624221 2431 ntBASIC5.64□□□□□ -1.51
CCDC88CQ9P219 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC88CQ9P219 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
CCDC88CQ9P219 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC88CQ9P219 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC88CQ9P219 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC88CQ9P219 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CCDC88CQ9P219 AC005224.3-201ENST00000584683 2140 ntBASIC5.64□□□□□ -1.51
CCDC88CQ9P219 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC88CQ9P219 RNA5SP234-201ENST00000363916 119 ntBASIC5.64□□□□□ -1.51
CCDC88CQ9P219 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
CCDC88CQ9P219 UBE2V1P14-201ENST00000415815 558 ntBASIC5.64□□□□□ -1.51
CCDC88CQ9P219 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC88CQ9P219 RPL34P3-201ENST00000421454 338 ntBASIC5.64□□□□□ -1.51
CCDC88CQ9P219 RPL12P16-201ENST00000431098 498 ntBASIC5.64□□□□□ -1.51
CCDC88CQ9P219 SUMO2P3-201ENST00000438311 288 ntBASIC5.64□□□□□ -1.51
CCDC88CQ9P219 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC88CQ9P219 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC88CQ9P219 HMGN1P36-201ENST00000446623 298 ntBASIC5.64□□□□□ -1.51
CCDC88CQ9P219 AP001804.1-201ENST00000526868 919 ntBASIC5.64□□□□□ -1.51
CCDC88CQ9P219 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC88CQ9P219 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC88CQ9P219 MIR3176-201ENST00000582210 90 ntBASIC5.64□□□□□ -1.51
CCDC88CQ9P219 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC88CQ9P219 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC88CQ9P219 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC88CQ9P219 AC004836.1-201ENST00000623032 634 ntBASIC5.64□□□□□ -1.51
CCDC88CQ9P219 AC018659.2-201ENST00000624690 715 ntBASIC5.64□□□□□ -1.51
CCDC88CQ9P219 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC88CQ9P219 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC88CQ9P219 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC88CQ9P219 PARP4P2-201ENST00000446672 3326 ntBASIC5.63□□□□□ -1.51
CCDC88CQ9P219 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC88CQ9P219 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC88CQ9P219 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CCDC88CQ9P219 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC88CQ9P219 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC88CQ9P219 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC88CQ9P219 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CCDC88CQ9P219 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CCDC88CQ9P219 RNA5SP46-201ENST00000362370 120 ntBASIC5.63□□□□□ -1.51
CCDC88CQ9P219 RNA5SP242-201ENST00000364171 118 ntBASIC5.63□□□□□ -1.51
CCDC88CQ9P219 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC88CQ9P219 AL391361.1-201ENST00000405580 489 ntBASIC5.63□□□□□ -1.51
CCDC88CQ9P219 RN7SKP206-201ENST00000410823 293 ntBASIC5.63□□□□□ -1.51
CCDC88CQ9P219 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC88CQ9P219 AL391987.1-201ENST00000441025 200 ntBASIC5.63□□□□□ -1.51
CCDC88CQ9P219 BMS1P10-201ENST00000443754 1120 ntBASIC5.63□□□□□ -1.51
CCDC88CQ9P219 RPS27AP3-201ENST00000453803 454 ntBASIC5.63□□□□□ -1.51
CCDC88CQ9P219 SCARNA18.1-201ENST00000516330 83 ntBASIC5.63□□□□□ -1.51
CCDC88CQ9P219 SUMO2P19-201ENST00000518920 295 ntBASIC5.63□□□□□ -1.51
CCDC88CQ9P219 AL049779.3-201ENST00000557141 606 ntBASIC5.63□□□□□ -1.51
CCDC88CQ9P219 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC88CQ9P219 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC88CQ9P219 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC88CQ9P219 RPL12P48-201ENST00000605620 304 ntBASIC5.63□□□□□ -1.51
CCDC88CQ9P219 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.63□□□□□ -1.51
CCDC88CQ9P219 MIR4302-201ENST00000638058 60 ntBASIC5.63□□□□□ -1.51
CCDC88CQ9P219 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC88CQ9P219 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.63□□□□□ -1.51
CCDC88CQ9P219 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC88CQ9P219 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC88CQ9P219 MTCO1P11-201ENST00000429111 1528 ntBASIC5.63□□□□□ -1.51
CCDC88CQ9P219 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC88CQ9P219 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC88CQ9P219 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC88CQ9P219 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
CCDC88CQ9P219 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC88CQ9P219 BMS1P17-202ENST00000416720 316 ntBASIC5.62□□□□□ -1.51
CCDC88CQ9P219 BX119321.1-201ENST00000428912 797 ntBASIC5.62□□□□□ -1.51
CCDC88CQ9P219 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC88CQ9P219 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC88CQ9P219 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC88CQ9P219 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.62□□□□□ -1.51
CCDC88CQ9P219 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC88CQ9P219 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC88CQ9P219 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC88CQ9P219 AC106872.5-201ENST00000508856 1416 ntBASIC5.62□□□□□ -1.51
CCDC88CQ9P219 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC88CQ9P219 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CCDC88CQ9P219 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
CCDC88CQ9P219 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC88CQ9P219 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC88CQ9P219 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC88CQ9P219 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC88CQ9P219 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC88CQ9P219 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC88CQ9P219 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC88CQ9P219 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC88CQ9P219 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC88CQ9P219 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CCDC88CQ9P219 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC88CQ9P219 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC88CQ9P219 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CCDC88CQ9P219 AC092642.1-201ENST00000392417 425 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms