Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 CXCR2P1-202ENST00000443392 1074 ntBASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 BMS1P10-201ENST00000443754 1120 ntBASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 Z73417.1-201ENST00000447373 778 ntBASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 AC092685.1-201ENST00000447960 1243 ntBASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 PPIAP27-201ENST00000453800 265 ntBASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 AC110749.1-201ENST00000462007 357 ntBASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 SNX18P24-201ENST00000505249 671 ntBASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 SNORA19.3-201ENST00000516165 130 ntBASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 AC103833.1-201ENST00000517442 172 ntBASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 AC060775.1-201ENST00000518241 520 ntBASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 SUMO2P19-201ENST00000518920 295 ntBASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 AP000662.1-201ENST00000530952 487 ntBASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 AC090022.1-201ENST00000546569 311 ntBASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 AC008055.1-201ENST00000547032 609 ntBASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 AP001496.3-201ENST00000580230 913 ntBASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 VN1R81P-201ENST00000602085 372 ntBASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 RNU4-5P-201ENST00000607255 135 ntBASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 IGKV2OR2-10-201ENST00000613976 311 ntBASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 U1.41-201ENST00000617626 165 ntBASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 AL512427.1-201ENST00000618593 349 ntBASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 AC009120.2-204ENST00000621548 2032 ntBASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 AC011592.1-201ENST00000624647 3634 ntBASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 NEK2P2-201ENST00000438441 1338 ntBASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 PARN-201ENST00000341484 2100 ntTSL 2 BASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 LPAL2-203ENST00000454031 2498 ntBASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 AC006994.1-201ENST00000438212 839 ntBASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 RPL6P30-201ENST00000443382 862 ntBASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 AC006326.1-201ENST00000445465 787 ntBASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 AC004263.1-201ENST00000479327 332 ntBASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 AL117351.2-201ENST00000513571 157 ntBASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 IGHVIII-67-4-201ENST00000524281 296 ntBASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 AC036111.2-201ENST00000533247 901 ntBASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 RN7SL208P-201ENST00000577964 296 ntBASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 AC021171.1-201ENST00000603137 706 ntBASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 AC026741.1-201ENST00000605892 482 ntBASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 OR7M1P-201ENST00000608946 533 ntBASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 AP005229.2-201ENST00000609980 697 ntBASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 AL080312.2-201ENST00000613001 630 ntBASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 AL445649.1-201ENST00000615941 691 ntBASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 REV3L-214ENST00000619481 969 ntTSL 5 BASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 AP001264.1-201ENST00000620602 703 ntBASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 AC122713.2-201ENST00000624942 3335 ntBASIC7.25□□□□□ -1.25
PDLIM7Q9NR12 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms