Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC7.1□□□□□ -1.27
VTA1Q9NP79 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC7.1□□□□□ -1.27
VTA1Q9NP79 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC7.1□□□□□ -1.27
VTA1Q9NP79 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.1□□□□□ -1.27
VTA1Q9NP79 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC7.1□□□□□ -1.27
VTA1Q9NP79 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
VTA1Q9NP79 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
VTA1Q9NP79 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC7.1□□□□□ -1.27
VTA1Q9NP79 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC7.1□□□□□ -1.27
VTA1Q9NP79 AC018638.3-201ENST00000461273 132 ntBASIC7.1□□□□□ -1.27
VTA1Q9NP79 RPL7P51-201ENST00000490532 749 ntBASIC7.1□□□□□ -1.27
VTA1Q9NP79 SNORA58-201ENST00000505219 137 ntBASIC7.1□□□□□ -1.27
VTA1Q9NP79 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7.1□□□□□ -1.27
VTA1Q9NP79 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.1□□□□□ -1.27
VTA1Q9NP79 RNA5SP340-201ENST00000517132 107 ntBASIC7.1□□□□□ -1.27
VTA1Q9NP79 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
VTA1Q9NP79 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
VTA1Q9NP79 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
VTA1Q9NP79 AC007956.1-201ENST00000555623 542 ntBASIC7.1□□□□□ -1.27
VTA1Q9NP79 AC023158.1-201ENST00000561632 1025 ntBASIC7.1□□□□□ -1.27
VTA1Q9NP79 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC7.1□□□□□ -1.27
VTA1Q9NP79 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC7.1□□□□□ -1.27
VTA1Q9NP79 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC7.1□□□□□ -1.27
VTA1Q9NP79 AC068768.2-201ENST00000602352 343 ntBASIC7.1□□□□□ -1.27
VTA1Q9NP79 AL158050.2-201ENST00000605336 568 ntBASIC7.1□□□□□ -1.27
VTA1Q9NP79 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC7.1□□□□□ -1.27
VTA1Q9NP79 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC7.1□□□□□ -1.27
VTA1Q9NP79 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC7.1□□□□□ -1.27
VTA1Q9NP79 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.1□□□□□ -1.27
VTA1Q9NP79 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
VTA1Q9NP79 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
VTA1Q9NP79 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.1□□□□□ -1.27
VTA1Q9NP79 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
VTA1Q9NP79 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.1□□□□□ -1.27
VTA1Q9NP79 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
VTA1Q9NP79 AC009120.2-204ENST00000621548 2032 ntBASIC7.1□□□□□ -1.27
VTA1Q9NP79 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC7.1□□□□□ -1.27
VTA1Q9NP79 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.1□□□□□ -1.27
VTA1Q9NP79 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7.1□□□□□ -1.27
VTA1Q9NP79 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
VTA1Q9NP79 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC7.09□□□□□ -1.27
VTA1Q9NP79 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC7.09□□□□□ -1.27
VTA1Q9NP79 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
VTA1Q9NP79 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
VTA1Q9NP79 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
VTA1Q9NP79 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
VTA1Q9NP79 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
VTA1Q9NP79 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
VTA1Q9NP79 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
VTA1Q9NP79 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
VTA1Q9NP79 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
VTA1Q9NP79 LYPLA1P3-201ENST00000402650 695 ntBASIC7.09□□□□□ -1.27
VTA1Q9NP79 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC7.09□□□□□ -1.27
VTA1Q9NP79 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC7.09□□□□□ -1.27
VTA1Q9NP79 PPIAP10-201ENST00000438675 458 ntBASIC7.09□□□□□ -1.27
VTA1Q9NP79 MORF4-201ENST00000447135 971 ntBASIC7.09□□□□□ -1.27
VTA1Q9NP79 PPIAP20-201ENST00000449839 135 ntBASIC7.09□□□□□ -1.27
VTA1Q9NP79 BZW1P1-201ENST00000454901 1240 ntBASIC7.09□□□□□ -1.27
VTA1Q9NP79 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC7.09□□□□□ -1.27
VTA1Q9NP79 RPL5P12-201ENST00000477071 851 ntBASIC7.09□□□□□ -1.27
VTA1Q9NP79 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC7.09□□□□□ -1.27
VTA1Q9NP79 AC010460.2-201ENST00000509054 677 ntBASIC7.09□□□□□ -1.27
VTA1Q9NP79 AC093770.1-201ENST00000511559 571 ntBASIC7.09□□□□□ -1.27
VTA1Q9NP79 CR383658.1-201ENST00000514609 734 ntBASIC7.09□□□□□ -1.27
VTA1Q9NP79 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC7.09□□□□□ -1.27
VTA1Q9NP79 RN7SKP238-201ENST00000516483 249 ntBASIC7.09□□□□□ -1.27
VTA1Q9NP79 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC7.09□□□□□ -1.27
VTA1Q9NP79 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC7.09□□□□□ -1.27
VTA1Q9NP79 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.09□□□□□ -1.27
VTA1Q9NP79 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC7.09□□□□□ -1.27
VTA1Q9NP79 AP003396.4-201ENST00000527574 265 ntBASIC7.09□□□□□ -1.27
VTA1Q9NP79 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC7.09□□□□□ -1.27
VTA1Q9NP79 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC7.09□□□□□ -1.27
VTA1Q9NP79 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC7.09□□□□□ -1.27
VTA1Q9NP79 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC7.09□□□□□ -1.27
VTA1Q9NP79 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC7.09□□□□□ -1.27
VTA1Q9NP79 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
VTA1Q9NP79 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC7.09□□□□□ -1.27
VTA1Q9NP79 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC7.09□□□□□ -1.27
VTA1Q9NP79 AL008723.3-201ENST00000608926 449 ntBASIC7.09□□□□□ -1.27
VTA1Q9NP79 AL137246.2-201ENST00000613439 662 ntBASIC7.09□□□□□ -1.27
VTA1Q9NP79 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7.09□□□□□ -1.27
VTA1Q9NP79 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC7.09□□□□□ -1.27
VTA1Q9NP79 RFPL4AP6-201ENST00000616792 846 ntBASIC7.09□□□□□ -1.27
VTA1Q9NP79 AP003476.1-201ENST00000623984 516 ntBASIC7.09□□□□□ -1.27
VTA1Q9NP79 OXSM-209ENST00000626005 309 ntTSL 3 BASIC7.09□□□□□ -1.27
VTA1Q9NP79 OR4G3P-201ENST00000633500 913 ntBASIC7.09□□□□□ -1.27
VTA1Q9NP79 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC7.09□□□□□ -1.27
VTA1Q9NP79 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
VTA1Q9NP79 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.09□□□□□ -1.27
VTA1Q9NP79 AL359976.1-201ENST00000418655 3528 ntBASIC7.09□□□□□ -1.27
VTA1Q9NP79 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
VTA1Q9NP79 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
VTA1Q9NP79 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
VTA1Q9NP79 AC005332.9-201ENST00000620266 2921 ntBASIC7.09□□□□□ -1.27
VTA1Q9NP79 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
VTA1Q9NP79 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
VTA1Q9NP79 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.28
VTA1Q9NP79 OFD1P10Y-201ENST00000434110 1433 ntBASIC7.09□□□□□ -1.28
VTA1Q9NP79 AC105114.1-201ENST00000624795 1862 ntBASIC7.09□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms