Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC007349.4-201ENST00000608114 532 ntBASIC7.08□□□□□ -1.28
FOXP3Q9BZS1 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC7.08□□□□□ -1.28
FOXP3Q9BZS1 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC7.08□□□□□ -1.28
FOXP3Q9BZS1 AC010333.3-201ENST00000615100 402 ntBASIC7.08□□□□□ -1.28
FOXP3Q9BZS1 AC006338.2-201ENST00000616864 791 ntBASIC7.08□□□□□ -1.28
FOXP3Q9BZS1 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC7.08□□□□□ -1.28
FOXP3Q9BZS1 SNX18P10-201ENST00000625014 519 ntBASIC7.08□□□□□ -1.28
FOXP3Q9BZS1 GMFB-210ENST00000628554 639 ntTSL 4 BASIC7.08□□□□□ -1.28
FOXP3Q9BZS1 AC063952.1-203ENST00000634410 658 ntBASIC7.08□□□□□ -1.28
FOXP3Q9BZS1 UGP2-232ENST00000640075 567 ntTSL 5 BASIC7.08□□□□□ -1.28
FOXP3Q9BZS1 OR7E161P-202ENST00000641994 1033 ntBASIC7.08□□□□□ -1.28
FOXP3Q9BZS1 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
FOXP3Q9BZS1 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
FOXP3Q9BZS1 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC7.08□□□□□ -1.28
FOXP3Q9BZS1 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
FOXP3Q9BZS1 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
FOXP3Q9BZS1 AP002370.1-201ENST00000528055 1602 ntBASIC7.08□□□□□ -1.28
FOXP3Q9BZS1 AL359694.2-201ENST00000567753 1615 ntBASIC7.08□□□□□ -1.28
FOXP3Q9BZS1 MFSD8-256ENST00000641949 1640 ntBASIC7.08□□□□□ -1.28
FOXP3Q9BZS1 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
FOXP3Q9BZS1 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
FOXP3Q9BZS1 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC7.08□□□□□ -1.28
FOXP3Q9BZS1 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.08□□□□□ -1.28
FOXP3Q9BZS1 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 NEK2P2-201ENST00000438441 1338 ntBASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 AC022905.1-201ENST00000503430 3048 ntBASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 OR2M1P-201ENST00000318104 951 ntBASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 Y_RNA.51-201ENST00000362725 102 ntBASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 RNA5SP65-201ENST00000363166 119 ntBASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 FAUP2-201ENST00000394301 401 ntBASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 TAF9BP2-201ENST00000400856 499 ntBASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 LYPLA1P3-201ENST00000402650 695 ntBASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 AL049697.3-201ENST00000406493 982 ntBASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 RNU4-72P-201ENST00000410754 173 ntBASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 RPS3AP37-201ENST00000419176 745 ntBASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 DEFB130D-201ENST00000426866 237 ntBASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 SNX19-202ENST00000426933 888 ntTSL 2 BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 AC013403.1-201ENST00000436954 263 ntBASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 CYCSP44-201ENST00000448560 313 ntBASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 RPS3AP43-201ENST00000479743 781 ntBASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 AC011037.1-201ENST00000483964 558 ntBASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 RN7SL561P-201ENST00000488553 281 ntBASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 AC026414.1-201ENST00000504046 698 ntBASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 AC010442.1-201ENST00000515583 816 ntBASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 MTND2P26-201ENST00000528255 1029 ntBASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 AL031846.1-201ENST00000560933 314 ntBASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 MTCO3P22-201ENST00000603219 784 ntBASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 AC007255.2-201ENST00000604053 631 ntBASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 QTRT1P1-201ENST00000604344 1078 ntBASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 AC010245.2-201ENST00000606908 1167 ntBASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 AC024060.1-201ENST00000607052 494 ntBASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 AC245407.2-201ENST00000614199 451 ntBASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 AC007786.3-201ENST00000615154 596 ntBASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 AC093278.2-201ENST00000564956 2485 ntBASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 TATDN2P3-201ENST00000452855 3665 ntBASIC7.07□□□□□ -1.28
FOXP3Q9BZS1 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms