Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC112255.1-201ENST00000624070 2493 ntBASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 AC034229.2-201ENST00000566945 2508 ntBASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 MTHFD2P5-201ENST00000320415 844 ntBASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 SNORD16-201ENST00000362803 99 ntBASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 RN7SKP161-201ENST00000411110 305 ntBASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 AL024507.1-201ENST00000412741 274 ntBASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 NIFKP3-201ENST00000417799 865 ntBASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 AC006509.1-201ENST00000420788 634 ntBASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 WDR82P2-201ENST00000444540 928 ntBASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 AL020997.1-201ENST00000446554 349 ntBASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 AL445991.1-201ENST00000450381 475 ntBASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 AL034369.1-201ENST00000453808 477 ntBASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 RN7SL83P-201ENST00000468131 297 ntBASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 AP003385.3-201ENST00000472498 287 ntBASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 RPS4XP17-201ENST00000479057 754 ntBASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 AL121594.4-201ENST00000556211 1196 ntBASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 AC005632.2-201ENST00000564271 828 ntBASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 MIR3159-201ENST00000584572 74 ntBASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 AC005702.3-201ENST00000585345 1447 ntBASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 AC018754.1-201ENST00000607486 925 ntBASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 AC005021.1-201ENST00000608730 355 ntBASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 MIR6503-201ENST00000622884 86 ntBASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 AC011369.2-201ENST00000624423 1567 ntBASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 AC068213.1-201ENST00000625124 226 ntBASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 FRG1DP-201ENST00000635586 771 ntBASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 AC099654.8-201ENST00000637757 681 ntBASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM54Q9BYV2 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 OR7A2P-201ENST00000304105 930 ntBASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 NPM1P38-201ENST00000403835 865 ntBASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 RN7SKP221-201ENST00000410420 301 ntBASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 TMA16P2-201ENST00000413187 601 ntBASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 RPS17P17-201ENST00000419392 409 ntBASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 AL157884.1-201ENST00000424561 454 ntBASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 MRPS21P3-201ENST00000436696 262 ntBASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 RNFT1P2-201ENST00000443064 757 ntBASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 OR13K1P-201ENST00000444577 975 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms